RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
LIMS2-216ENST00000494613 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
LIMS2-216ENST00000494613 LYPD5Q6UWN5 251 aa10.73□□□□□ -0.69
LIMS2-216ENST00000494613 KRTAP1-5Q9BYS1 174 aa10.73□□□□□ -0.69
LIMS2-216ENST00000494613 GGTLC3B5MD39 225 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 M0R2P5 195 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 TYMSP04818 313 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 KCNS1Q96KK3 526 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 LINC00479Q96M42 142 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 NDFIP1Q9BT67 221 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 SDF2L1Q9HCN8 221 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 CYTL1Q9NRR1 136 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 C11orf21Q9P2W6 132 aa10.72□□□□□ -0.69
LIMS2-216ENST00000494613 PKD1P98161 4303 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 A0A1W2PPQ1 181 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 A0A1W2PRE2 83 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 TAAR5O14804 337 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 MED14OSP0DP75 135 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 FLI1Q01543 452 aaPredicted RBP10.71□□□□□ -0.69
LIMS2-216ENST00000494613 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 PRNTQ86SH4 94 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 OR4C5Q8NGB2 326 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 KRTAP17-1Q9BYP8 105 aa10.71□□□□□ -0.69
LIMS2-216ENST00000494613 CTXND1A0A1B0GTU2 59 aa10.7□□□□□ -0.7
LIMS2-216ENST00000494613 SIVA1O15304 175 aa10.7□□□□□ -0.7
LIMS2-216ENST00000494613 ARPC5O15511 151 aa10.7□□□□□ -0.7
LIMS2-216ENST00000494613 GCGP01275 180 aa10.7□□□□□ -0.7
LIMS2-216ENST00000494613 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
LIMS2-216ENST00000494613 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 TRAV34A0A0B4J273 112 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 K7EQD1 137 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 IFNA7P01567 189 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 SAPCD1Q5SSQ6 148 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 AKR1C8PQ5T2L2 129 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 CYB561D1Q8N8Q1 229 aa10.69□□□□□ -0.7
LIMS2-216ENST00000494613 FBLL1A6NHQ2 334 aaKnown RBP10.68□□□□□ -0.7
LIMS2-216ENST00000494613 NXPH4O95158 308 aa10.68□□□□□ -0.7
LIMS2-216ENST00000494613 PFN1P07737 140 aaKnown RBP10.68□□□□□ -0.7
LIMS2-216ENST00000494613 GYPEP15421 78 aa10.68□□□□□ -0.7
LIMS2-216ENST00000494613 FGF8P55075 233 aaPredicted RBP10.68□□□□□ -0.7
LIMS2-216ENST00000494613 UBE2G2P60604 165 aa10.68□□□□□ -0.7
LIMS2-216ENST00000494613 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
LIMS2-216ENST00000494613 C9JCJ5 164 aa10.67□□□□□ -0.7
LIMS2-216ENST00000494613 ORM1P02763 201 aa10.67□□□□□ -0.7
LIMS2-216ENST00000494613 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
LIMS2-216ENST00000494613 ZNF876PQ49A33 203 aa10.67□□□□□ -0.7
LIMS2-216ENST00000494613 NKX6-2Q9C056 277 aaPredicted RBP10.67□□□□□ -0.7
LIMS2-216ENST00000494613 FAM74A7A6NL05 159 aa10.66□□□□□ -0.7
LIMS2-216ENST00000494613 SRIP30626 198 aa10.66□□□□□ -0.7
LIMS2-216ENST00000494613 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
LIMS2-216ENST00000494613 LOC100131303A0A0U1RQF7 123 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 PGPEP1LA6NFU8 196 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 ZFP69Q49AA0 526 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 DPPA3Q6W0C5 159 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 OR11H4Q8NGC9 324 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
LIMS2-216ENST00000494613 C9orf85Q96MD7 179 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 HERC2O95714 4834 aa10.65□□□□□ -0.7
LIMS2-216ENST00000494613 PKHD1P08F94 4074 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 RS1O15537 224 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 RNASE3P12724 160 aaKnown RBP10.64□□□□□ -0.71
LIMS2-216ENST00000494613 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
LIMS2-216ENST00000494613 PPT1P50897 306 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 HIST1H2BAQ96A08 127 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 PTH2Q96A98 100 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 ARL2-SNX15V9GYD0 113 aa10.64□□□□□ -0.71
LIMS2-216ENST00000494613 IGKV3D-20A0A0C4DH25 116 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 HMSDA8MTL9 139 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 PEX7O00628 323 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 CIDEAO60543 219 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 FHITP49789 147 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 CRIP1P50238 77 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 LINC00315P59091 139 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 TXNDC17Q9BRA2 123 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
LIMS2-216ENST00000494613 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
LIMS2-216ENST00000494613 IGHV3-73A0A0B4J1V6 119 aa10.62□□□□□ -0.71
LIMS2-216ENST00000494613 SPATA12Q7Z6I5 190 aa10.62□□□□□ -0.71
LIMS2-216ENST00000494613 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
LIMS2-216ENST00000494613 STOML3Q8TAV4 291 aa10.62□□□□□ -0.71
LIMS2-216ENST00000494613 A0A0D9SG52 128 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 SEC11BP0C7V7 166 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 ZNF345Q14585 488 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 CST9LP1Q5W188 147 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 Q6ZRN7 208 aaPredicted RBP10.61□□□□□ -0.71
LIMS2-216ENST00000494613 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 ZFP30Q9Y2G7 519 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 LY96Q9Y6Y9 160 aa10.61□□□□□ -0.71
LIMS2-216ENST00000494613 TRBV6-4A0A1B0GX49 114 aa10.6□□□□□ -0.71
LIMS2-216ENST00000494613 S100A4P26447 101 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms