RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 IGKV2D-24A0A075B6R9 120 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 DEFB134Q4QY38 66 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 SPRNQ5BIV9 151 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 ZCCHC23Q6ZST2 131 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 C9orf163Q8N9P6 203 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 NPVFQ9HCQ7 196 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 WNK3Q9BYP7 1800 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 DAPK1P53355 1430 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 CEP162Q5TB80 1403 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 C10orf71Q711Q0 1435 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 PRR14LQ5THK1 2151 aa3.95□□□□□ -1.78
SNX13-210ENST00000494402 CACNA1AO00555 2505 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 SCN3AQ9NY46 2000 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 HOXB6P17509 224 aaKnown RBP3.94□□□□□ -1.78
SNX13-210ENST00000494402 KRTAP10-9P60411 292 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 RPL7L1Q6DKI1 246 aaKnown RBP3.94□□□□□ -1.78
SNX13-210ENST00000494402 Q6ZTI0 123 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 CMTM2Q8TAZ6 248 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 SMARCA4P51532 1647 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 MCM3APO60318 1980 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 CEP350Q5VT06 3117 aa3.94□□□□□ -1.78
SNX13-210ENST00000494402 A6NIN4 97 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 GNGT2O14610 69 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 CGAP01215 116 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 CBLN1P23435 193 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 RBM3P98179 157 aaKnown RBP3.93□□□□□ -1.78
SNX13-210ENST00000494402 S100A7L2Q5SY68 101 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 CLECL1Q8IZS7 167 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 Q8TAT8 98 aa3.93□□□□□ -1.78
SNX13-210ENST00000494402 CPSF1Q10570 1443 aaKnown RBP3.93□□□□□ -1.78
SNX13-210ENST00000494402 MGAMO43451 1857 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 ABCC3O15438 1527 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 IGKV3-11P04433 115 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 ASIPP42127 132 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 ZNF833PQ6ZTB9 187 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 COMMD6Q7Z4G1 85 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
SNX13-210ENST00000494402 ANKRD36BQ8N2N9 1353 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 MAP3K1Q13233 1512 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 ERICH3Q5RHP9 1530 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 TRAV17A0A0B4J275 112 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 ABCC5O15440 1437 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 CTSGP08311 255 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 P0C880 135 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 POLR2JP52435 117 aaKnown RBP3.91□□□□□ -1.78
SNX13-210ENST00000494402 SLC48A1Q6P1K1 146 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 CASKIN1Q8WXD9 1431 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.91□□□□□ -1.78
SNX13-210ENST00000494402 NACAE9PAV3 2078 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 KDM6BO15054 1643 aa3.91□□□□□ -1.78
SNX13-210ENST00000494402 ROBO1Q9Y6N7 1651 aa3.9□□□□□ -1.78
SNX13-210ENST00000494402 KDM5DQ9BY66 1539 aa3.9□□□□□ -1.78
SNX13-210ENST00000494402 COL24A1Q17RW2 1714 aa3.9□□□□□ -1.78
SNX13-210ENST00000494402 C2orf70A6NJV1 201 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 GYPAP02724 150 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 UBE2G1P62253 170 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 PEA15Q15121 130 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 Q1T7F1 81 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 C15orf53Q8NAA6 179 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 MED9Q9NWA0 146 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 CCL26Q9Y258 94 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 PLEKHH2Q8IVE3 1493 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 MYO9BQ13459 2157 aa3.9□□□□□ -1.79
SNX13-210ENST00000494402 PDE6HQ13956 83 aa3.89□□□□□ -1.79
SNX13-210ENST00000494402 RHOHQ15669 191 aa3.89□□□□□ -1.79
SNX13-210ENST00000494402 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
SNX13-210ENST00000494402 KRTAP26-1Q6PEX3 210 aa3.89□□□□□ -1.79
SNX13-210ENST00000494402 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
SNX13-210ENST00000494402 PMCHL2Q9BQD1 86 aa3.89□□□□□ -1.79
SNX13-210ENST00000494402 KIAA1549Q9HCM3 1950 aa3.89□□□□□ -1.79
SNX13-210ENST00000494402 UACAQ9BZF9 1416 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 F8W1H4 67 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 CCKP06307 115 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.88□□□□□ -1.79
SNX13-210ENST00000494402 LYPD1Q8N2G4 141 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 C10orf82Q8WW14 230 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 MRPL35Q9NZE8 188 aaKnown RBP3.88□□□□□ -1.79
SNX13-210ENST00000494402 ADGRB3O60242 1522 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 SLIT2O94813 1529 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 STRCQ7RTU9 1775 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 MYO16Q9Y6X6 1858 aa3.88□□□□□ -1.79
SNX13-210ENST00000494402 SCAPERQ9BY12 1400 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 PXDNLA1KZ92 1463 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 IFT140Q96RY7 1462 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 ARHGAP32A7KAX9 2087 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 SLIT3O75094 1523 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 IGKV1D-17A0A075B6S4 117 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 K7EP34 96 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 SLC25A6P12236 298 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 KRTDAPP60985 99 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 ELOBQ15370 118 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 UNQ5815/PRO19632Q6UWF5 114 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 C4orf3Q8WVX3 66 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 MUC4Q99102 2169 aa3.87□□□□□ -1.79
SNX13-210ENST00000494402 RTL8CO15255 209 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms