RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 A0A0D9SG52 128 aa10.21□□□□□ -0.77
ATG4B-224ENST00000494132 LGALS9BQ3B8N2 356 aa10.21□□□□□ -0.77
ATG4B-224ENST00000494132 FAM213BQ8TBF2 198 aa10.21□□□□□ -0.77
ATG4B-224ENST00000494132 PEX7O00628 323 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 RTL8CO15255 209 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 PFDN1O60925 122 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 TDRG1Q3Y452 100 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 Q6ZR54 194 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 TMUB2Q71RG4 321 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 ZNRF2Q8NHG8 242 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 SDF2L1Q9HCN8 221 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 ARL2-SNX15V9GYD0 113 aa10.2□□□□□ -0.78
ATG4B-224ENST00000494132 A0A096LPF7 62 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 SEC11BP0C7V7 166 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 FHL2Q14192 279 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 ESRGQ1W209 222 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 ZFP69Q49AA0 526 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 SMUG1Q53HV7 270 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 SFT2D1Q8WV19 159 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 SPXQ9BT56 116 aa10.19□□□□□ -0.78
ATG4B-224ENST00000494132 hCG_2014768A0A024R1R8 64 aa10.18□□□□□ -0.78
ATG4B-224ENST00000494132 PAX4O43316 350 aa10.18□□□□□ -0.78
ATG4B-224ENST00000494132 Q86TA4 180 aa10.18□□□□□ -0.78
ATG4B-224ENST00000494132 STOML3Q8TAV4 291 aa10.18□□□□□ -0.78
ATG4B-224ENST00000494132 KCNS1Q96KK3 526 aa10.18□□□□□ -0.78
ATG4B-224ENST00000494132 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
ATG4B-224ENST00000494132 TRGV4A0A0C4DH28 118 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 C9JCJ5 164 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 H3BNG1 76 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 PAGE4O60829 102 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 PFN1P07737 140 aaKnown RBP10.17□□□□□ -0.78
ATG4B-224ENST00000494132 CRYBA4P53673 196 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 FAM3BP58499 235 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-224ENST00000494132 Q6ZNX1 250 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 RASL10AQ92737 203 aa10.17□□□□□ -0.78
ATG4B-224ENST00000494132 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 PRSS29PA6NIE9 313 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 M0R2P5 195 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 TPT1P13693 172 aaKnown RBP10.16□□□□□ -0.78
ATG4B-224ENST00000494132 PPT1P50897 306 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 LGALSLQ3ZCW2 172 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-224ENST00000494132 SAPCD1Q5SSQ6 148 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 HHLA3Q9XRX5 114 aa10.16□□□□□ -0.78
ATG4B-224ENST00000494132 FBLL1A6NHQ2 334 aaKnown RBP10.15□□□□□ -0.78
ATG4B-224ENST00000494132 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 UBE2G1P62253 170 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 OR4C5Q8NGB2 326 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 MBD3L1Q8WWY6 194 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 NKX6-2Q9C056 277 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-224ENST00000494132 Q9H8V8 135 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 ICOSQ9Y6W8 199 aa10.15□□□□□ -0.78
ATG4B-224ENST00000494132 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 H2AFB1P0C5Y9 115 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 AKR1C3P42330 323 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 EIF5AP63241 154 aaKnown RBP10.14□□□□□ -0.79
ATG4B-224ENST00000494132 C1orf134Q5TEV5 83 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 DPPA3Q6W0C5 159 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 LINC00336Q6ZUF6 198 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 TCTE3Q8IZS6 198 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 NHLRC2Q8NBF2 726 aa10.14□□□□□ -0.79
ATG4B-224ENST00000494132 IGHV3-73A0A0B4J1V6 119 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 M0R036 132 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
ATG4B-224ENST00000494132 CRIP1P50238 77 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 ZNF876PQ49A33 203 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 KRTAP1-5Q9BYS1 174 aa10.13□□□□□ -0.79
ATG4B-224ENST00000494132 MRPS16Q9Y3D3 137 aaKnown RBP10.13□□□□□ -0.79
ATG4B-224ENST00000494132 PGPEP1LA6NFU8 196 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 SH2D1AO60880 128 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 ORM1P02763 201 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 GYPEP15421 78 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 FMC1Q96HJ9 113 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 HECTD4Q9Y4D8 3996 aa10.12□□□□□ -0.79
ATG4B-224ENST00000494132 GRIFINA4D1Z8 144 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 K7EQD1 137 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 C1QBP02746 253 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 CCL20P78556 96 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 SLAQ13239 276 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 SOHLH1Q5JUK2 328 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 ZNF506Q5JVG8 444 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 UPK3BQ9BT76 320 aa10.11□□□□□ -0.79
ATG4B-224ENST00000494132 TMSB15BA0A087X1C1 80 aa10.1□□□□□ -0.79
ATG4B-224ENST00000494132 B4DEV8 164 aa10.1□□□□□ -0.79
ATG4B-224ENST00000494132 H3BVH4 76 aa10.1□□□□□ -0.79
ATG4B-224ENST00000494132 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
ATG4B-224ENST00000494132 SRIP30626 198 aa10.1□□□□□ -0.79
ATG4B-224ENST00000494132 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
ATG4B-224ENST00000494132 CFAP126Q5VTH2 177 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms