RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GAGE12GP0CL81 117 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 GAGE12IP0CL82 117 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 SULT1A2P50226 295 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 ANXA2RQ3ZCQ2 193 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 DPPA3Q6W0C5 159 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 Q6ZTI0 123 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 NAGKQ9UJ70 344 aa8.23□□□□□ -1.09
UBA3-211ENST00000493957 SNURFLB1AK76 121 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 LY6G6CO95867 125 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 Q86TA4 180 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 MDFICQ9P1T7 246 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 VPS13DQ5THJ4 4388 aa8.22□□□□□ -1.09
UBA3-211ENST00000493957 K7EQM0 130 aa8.21□□□□□ -1.1
UBA3-211ENST00000493957 TCL1AP56279 114 aa8.21□□□□□ -1.1
UBA3-211ENST00000493957 TMEM183BQ1AE95 376 aa8.21□□□□□ -1.1
UBA3-211ENST00000493957 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.1
UBA3-211ENST00000493957 TMEM183AQ8IXX5 376 aa8.21□□□□□ -1.1
UBA3-211ENST00000493957 MRPL16Q9NX20 251 aaKnown RBP8.21□□□□□ -1.1
UBA3-211ENST00000493957 ARL2-SNX15V9GYD0 113 aa8.21□□□□□ -1.1
UBA3-211ENST00000493957 F5H768 121 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 GNRH2O43555 120 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 GCGP01275 180 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
UBA3-211ENST00000493957 IBA57Q5T440 356 aaKnown RBP8.2□□□□□ -1.1
UBA3-211ENST00000493957 LCE4AQ5TA78 99 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 EIF5AL1Q6IS14 154 aaKnown RBP8.2□□□□□ -1.1
UBA3-211ENST00000493957 TMEM88Q6PEY1 159 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 ZNF680Q8NEM1 530 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 HIST1H2BAQ96A08 127 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 NDFIP1Q9BT67 221 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 GNG13Q9P2W3 67 aa8.2□□□□□ -1.1
UBA3-211ENST00000493957 TRGV1A0A0A0MS02 117 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 TRAV1-1A0A0B4J248 108 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 TRAV21A0A0B4J279 112 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 SPINK4O60575 86 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 TYMSP04818 313 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 ATP5G1P05496 136 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 HOXA5P20719 270 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 RAB5CP51148 216 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 ZNF415Q09FC8 603 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 FAM159AQ6UWV7 190 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 ZC2HC1AQ96GY0 325 aa8.19□□□□□ -1.1
UBA3-211ENST00000493957 NKX6-2Q9C056 277 aaPredicted RBP8.19□□□□□ -1.1
UBA3-211ENST00000493957 IGHV3-16A0A0C4DH30 117 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 AKR1C3P42330 323 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 CRIP1P50238 77 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 PPT1P50897 306 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 TDRG1Q3Y452 100 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 SMUG1Q53HV7 270 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 NHLRC2Q8NBF2 726 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 NDUFAF3Q9BU61 184 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
UBA3-211ENST00000493957 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 TRGV11A0A075B6L2 103 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 FBLL1A6NHQ2 334 aaKnown RBP8.17□□□□□ -1.1
UBA3-211ENST00000493957 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
UBA3-211ENST00000493957 TCTAP57738 103 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 SAPCD1Q5SSQ6 148 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 LGALS9CQ6DKI2 356 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 FMC1Q96HJ9 113 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 SDF2L1Q9HCN8 221 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 DNAH6Q9C0G6 4158 aa8.17□□□□□ -1.1
UBA3-211ENST00000493957 IGKV3D-20A0A0C4DH25 116 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 TRBV6-1A0A0K0K1D8 114 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 LTAP01374 205 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 IGHV3-53P01767 116 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 UBE2G1P62253 170 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 TCEAL7Q9BRU2 100 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
UBA3-211ENST00000493957 MANBALQ9NQG1 85 aa8.16□□□□□ -1.1
UBA3-211ENST00000493957 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.1
UBA3-211ENST00000493957 A0A0J9YY99 117 aa8.15□□□□□ -1.1
UBA3-211ENST00000493957 SH2D1AO60880 128 aa8.15□□□□□ -1.1
UBA3-211ENST00000493957 OR5I1Q13606 314 aa8.15□□□□□ -1.1
UBA3-211ENST00000493957 TRAV26-1A0A087WT03 109 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 M0R036 132 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 NUDT3O95989 172 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 SFTA3P0C7M3 94 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 RNASE3P12724 160 aaKnown RBP8.14□□□□□ -1.11
UBA3-211ENST00000493957 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 ZNF575Q86XF7 245 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 C11orf52Q96A22 123 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 FAM210BQ96KR6 192 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 ZFP30Q9Y2G7 519 aa8.14□□□□□ -1.11
UBA3-211ENST00000493957 FABP5P3A8MUU1 101 aa8.13□□□□□ -1.11
UBA3-211ENST00000493957 BCL2P10415 239 aa8.13□□□□□ -1.11
UBA3-211ENST00000493957 RPL35P42766 123 aaKnown RBP8.13□□□□□ -1.11
UBA3-211ENST00000493957 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
UBA3-211ENST00000493957 LGALS9BQ3B8N2 356 aa8.13□□□□□ -1.11
UBA3-211ENST00000493957 PCNPQ8WW12 178 aaKnown RBP8.13□□□□□ -1.11
UBA3-211ENST00000493957 KCNS1Q96KK3 526 aa8.13□□□□□ -1.11
UBA3-211ENST00000493957 C9orf85Q96MD7 179 aa8.13□□□□□ -1.11
UBA3-211ENST00000493957 C18orf15Q96N68 181 aa8.13□□□□□ -1.11
UBA3-211ENST00000493957 SPXQ9BT56 116 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms