RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 AMN1Q8IY45 258 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 METTL26Q96S19 204 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 D6R8Y8 96 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 CRXO43186 299 aaPredicted RBP10.58□□□□□ -0.72
VCP-207ENST00000493886 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 LYZL1Q6UWQ5 148 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 CRYBG3Q68DQ2 2970 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 IGHV3OR16-13A0A075B7E8 117 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 IGHV3-74A0A0B4J1X5 117 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 PET117Q6UWS5 81 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 ST20Q9HBF5 79 aa10.58□□□□□ -0.72
VCP-207ENST00000493886 A0A096LNT2 108 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 BLCAPP62952 87 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 IGHV3-49A0A0A0MS15 119 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 C7orf71A4D174 169 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 PPIFP30405 207 aaKnown RBP10.57□□□□□ -0.72
VCP-207ENST00000493886 WFDC3Q8IUB2 231 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 VGLL1Q99990 258 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 ZNF418Q8TF45 676 aaPredicted RBP10.57□□□□□ -0.72
VCP-207ENST00000493886 RAX2Q96IS3 184 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 PRR25Q96S07 402 aa10.57□□□□□ -0.72
VCP-207ENST00000493886 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
VCP-207ENST00000493886 SH2D1AO60880 128 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 Q6ZS46 218 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 COX8CQ7Z4L0 72 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 C1QTNF4Q9BXJ3 329 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 U3KQE9 123 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 TMEM189A5PLL7 270 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 H3BUA1 57 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 JMJD8Q96S16 334 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 SLC50A1Q9BRV3 221 aa10.56□□□□□ -0.72
VCP-207ENST00000493886 CELSR2Q9HCU4 2923 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 LRRK2Q5S007 2527 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 MAPK1IP1LQ8NDC0 245 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 USMG5Q96IX5 58 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 ZNF747Q9BV97 191 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
VCP-207ENST00000493886 H3BUT2 72 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 CD5LO43866 347 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 RNF182Q8N6D2 247 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 PTH2Q96A98 100 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
VCP-207ENST00000493886 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 ZNF80P51504 273 aaPredicted RBP10.54□□□□□ -0.72
VCP-207ENST00000493886 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 Q6AWC8 147 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 PRELID3AQ96N28 172 aa10.54□□□□□ -0.72
VCP-207ENST00000493886 UBR5O95071 2799 aaPredicted RBP10.53□□□□□ -0.72
VCP-207ENST00000493886 A0A096LNJ9 63 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 DEFB112Q30KQ8 113 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 J3QLI3 93 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 K7EP34 96 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 IGHV3-11P01762 117 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 KRTAP10-9P60411 292 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 ERCC8Q13216 396 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 TWIST1Q15672 202 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 LINC01545Q5VT33 79 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
VCP-207ENST00000493886 TRAV8-2A0A0B4J237 113 aa10.52□□□□□ -0.72
VCP-207ENST00000493886 NDUFA4O00483 81 aa10.52□□□□□ -0.72
VCP-207ENST00000493886 FBN2P35556 2912 aa10.52□□□□□ -0.72
VCP-207ENST00000493886 UNQ9165/PRO28630Q6UXU0 137 aa10.52□□□□□ -0.72
VCP-207ENST00000493886 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.72
VCP-207ENST00000493886 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
VCP-207ENST00000493886 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
VCP-207ENST00000493886 IGHV4-59P01825 116 aa10.52□□□□□ -0.73
VCP-207ENST00000493886 CACNG7P62955 275 aa10.52□□□□□ -0.73
VCP-207ENST00000493886 MRPL51Q4U2R6 128 aaKnown RBP10.52□□□□□ -0.73
VCP-207ENST00000493886 USP9YO00507 2555 aaPredicted RBP10.52□□□□□ -0.73
VCP-207ENST00000493886 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 ORM1P02763 201 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 C18orf15Q96N68 181 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 POLQO75417 2590 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 NPYP01303 97 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 CKS2P33552 79 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 CFHR3Q02985 330 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 GATD1Q8NB37 220 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 OR4X2Q8NGF9 303 aa10.51□□□□□ -0.73
VCP-207ENST00000493886 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
VCP-207ENST00000493886 EPG5Q9HCE0 2579 aa10.5□□□□□ -0.73
VCP-207ENST00000493886 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
VCP-207ENST00000493886 C12orf54Q6X4T0 127 aa10.5□□□□□ -0.73
VCP-207ENST00000493886 A0A0G2JLM5 398 aa10.5□□□□□ -0.73
VCP-207ENST00000493886 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms