RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	FAM167A-AS1	Q96KT0	104 aa		5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	FAM19A4	Q96LR4	140 aa		5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	HYLS1	Q96M11	299 aa		5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	ATP5S	Q99766	215 aa		5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	MRPL16	Q9NX20	251 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	PRO0255	Q9UI72	69 aa		5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	TP53TG3	Q9ULZ0	132 aa		5.2	□□□□□ -1.58
RBM39-238	ENST00000493853	TRBV7-9	A0A0J9YWB2	115 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853		A0A1W2PPV4	95 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	RBAKDN	A6NC62	111 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	NXPH4	O95158	308 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	RPL12	P30050	165 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	DEFA1	P59665	94 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	DEFA3	P59666	94 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	UBE2L3	P68036	154 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	KHDC3L	Q587J8	217 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	MUC21	Q5SSG8	566 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	ZFAND2A	Q8N6M9	145 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853		Q8TAT8	98 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	PCNP	Q8WW12	178 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	FXYD5	Q96DB9	178 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	PHYHIPL	Q96FC7	376 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	SPX	Q9BT56	116 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	SMIM3	Q9BZL3	60 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	PTTG2	Q9NZH5	202 aa		5.19	□□□□□ -1.58
RBM39-238	ENST00000493853	PGP	A6NDG6	321 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853		F5H697	171 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853		H0YIZ8	118 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	MPC2	O95563	127 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	TMEM183B	Q1AE95	376 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	PRR9	Q5T870	116 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	NEGR1	Q7Z3B1	354 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	NFE4	Q86UQ8	179 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	TMEM183A	Q8IXX5	376 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	KRTAP1-5	Q9BYS1	174 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	NAGK	Q9UJ70	344 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	RPH3AL	Q9UNE2	315 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	HSPB11	Q9Y547	144 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	LENEP	Q9Y5L5	61 aa		5.18	□□□□□ -1.58
RBM39-238	ENST00000493853	KIAA1109	Q2LD37	5005 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	TRIAP1	O43715	76 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	ORM1	P02763	201 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	SFTA3	P0C7M3	94 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	EVI2A	P22794	236 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	SRI	P30626	198 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	CRYBA4	P53673	196 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	H2BFS	P57053	126 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	LINC00315	P59091	139 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	ZNF266	Q14584	549 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	LYPD5	Q6UWN5	251 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853		Q6ZQT7	251 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	TXNDC17	Q9BRA2	123 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	MARVELD1	Q9BSK0	173 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	OTOR	Q9NRC9	128 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	MDFIC	Q9P1T7	246 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	MBD2	Q9UBB5	411 aa		5.17	□□□□□ -1.58
RBM39-238	ENST00000493853	DNAH2	Q9P225	4427 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853		C9JCJ5	164 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	ERVFC1-1	P60608	527 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853		Q6AWC8	147 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	PQLC2	Q6ZP29	291 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	GOLT1A	Q6ZVE7	132 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	OR4C5	Q8NGB2	326 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	ZNF479	Q96JC4	524 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	KCNS1	Q96KK3	526 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	NDFIP1	Q9BT67	221 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	TREM1	Q9NP99	234 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	LY96	Q9Y6Y9	160 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	FAT2	Q9NYQ8	4349 aa		5.16	□□□□□ -1.58
RBM39-238	ENST00000493853	DNAH17	Q9UFH2	4485 aa		5.15	□□□□□ -1.58
RBM39-238	ENST00000493853	TRAV21	A0A0B4J279	112 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853		K7EP13	123 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853		K7EQD1	137 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853		K7EQM0	130 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	GNRH2	O43555	120 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	IFITM3	Q01628	133 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	SH2D6	Q7Z4S9	175 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	IQCF2	Q8IXL9	164 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	ARL6IP6	Q8N6S5	226 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	NHLRC2	Q8NBF2	726 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	OR10G4	Q8NGN3	311 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	OR10G9	Q8NGN4	311 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	OR10G7	Q8NGN6	311 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	TMED6	Q8WW62	240 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	RASL10A	Q92737	203 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	SDF2L1	Q9HCN8	221 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	SCRT2	Q9NQ03	307 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	PKHD1	P08F94	4074 aa		5.15	□□□□□ -1.59
RBM39-238	ENST00000493853	NACA	E9PAV3	2078 aa		5.14	□□□□□ -1.59
RBM39-238	ENST00000493853	TRAV4	A0A0B4J268	109 aa		5.14	□□□□□ -1.59
RBM39-238	ENST00000493853		M0R2P5	195 aa		5.14	□□□□□ -1.59
RBM39-238	ENST00000493853	HMGB3	O15347	200 aa	Known RBP	5.14	□□□□□ -1.59
RBM39-238	ENST00000493853	EIF3G	O75821	320 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
RBM39-238	ENST00000493853	ASB13	Q8WXK3	278 aa		5.14	□□□□□ -1.59
RBM39-238	ENST00000493853	TRAV8-1	A0A0A6YYK1	113 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	IGHV3-16	A0A0C4DH30	117 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	SERTM2	A0A1B0GWG4	89 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853		F6UZH7	168 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	PSCA	O43653	123 aa		5.13	□□□□□ -1.59

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