RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 BCORQ6W2J9 1755 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 ARAP2Q8WZ64 1704 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 WT1-ASQ06250 92 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 LAMB2P55268 1798 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 TRAV23DV6A0A075B6W5 121 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 C10orf91Q5T1B1 145 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 KIR2DL5BQ8NHK3 375 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 RPL39LQ96EH5 51 aaKnown RBP6.17□□□□□ -1.42
BRCA1-221ENST00000493795 AGPAT4-IT1Q9H0P7 198 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 K7EN84 100 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 B3GALT5-AS1P59052 145 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 SPAG11BQ08648 103 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 DAND5Q8N907 189 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 KLK5Q9Y337 293 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-221ENST00000493795 Q6ZS92 163 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 ZNF491Q8N8L2 437 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 LOXP28300 417 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-221ENST00000493795 ASPHD1Q5U4P2 390 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 IGHV4-59P01825 116 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 GP9P14770 177 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 WFDC2Q14508 124 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 Q8N1Y9 231 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 F5P12259 2224 aa6.16□□□□□ -1.42
BRCA1-221ENST00000493795 WI2-2373I1.2A0A1W2PRP0 233 aa6.15□□□□□ -1.42
BRCA1-221ENST00000493795 GATA1P15976 413 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-221ENST00000493795 HIST2H2BDQ6DRA6 164 aa6.15□□□□□ -1.42
BRCA1-221ENST00000493795 APRG1Q8IVJ8 170 aa6.15□□□□□ -1.42
BRCA1-221ENST00000493795 MDC1Q14676 2089 aaKnown RBP6.15□□□□□ -1.42
BRCA1-221ENST00000493795 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-221ENST00000493795 C16orf54Q6UWD8 224 aa6.15□□□□□ -1.43
BRCA1-221ENST00000493795 VWCEQ96DN2 955 aa6.15□□□□□ -1.43
BRCA1-221ENST00000493795 VPREB3Q9UKI3 123 aa6.15□□□□□ -1.43
BRCA1-221ENST00000493795 ICE1Q9Y2F5 2266 aa6.15□□□□□ -1.43
BRCA1-221ENST00000493795 IGKV2D-26A0A0A0MRZ7 120 aa6.15□□□□□ -1.43
BRCA1-221ENST00000493795 WISP1O95388 367 aa6.15□□□□□ -1.43
BRCA1-221ENST00000493795 C11orf86A6NJI1 115 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 ITGB4P16144 1822 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 TRAV26-1A0A087WT03 109 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 UQCRQO14949 82 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-221ENST00000493795 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 RNF138Q8WVD3 245 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 TOMM6Q96B49 74 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 DLEC1Q9Y238 1755 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 PTPRZ1P23471 2315 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-221ENST00000493795 IGLV3-9A0A075B6K5 115 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 ATP5EP2Q5VTU8 51 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 HHLA3Q9XRX5 114 aa6.14□□□□□ -1.43
BRCA1-221ENST00000493795 CKAP5Q14008 2032 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 G3V4G9 280 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 FXYD2P54710 66 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 ATG2BQ96BY7 2078 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 PIKFYVEQ9Y2I7 2098 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 TRBV7-3A0A075B6L6 115 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 PRR30Q53SZ7 412 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-221ENST00000493795 RALGAPA1Q6GYQ0 2036 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 TDRD15B5MCY1 1934 aaKnown RBP6.13□□□□□ -1.43
BRCA1-221ENST00000493795 MTCL1Q9Y4B5 1905 aaKnown RBP6.13□□□□□ -1.43
BRCA1-221ENST00000493795 A6NED7 52 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 E9PLD3 99 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 PLXNB2O15031 1838 aa6.13□□□□□ -1.43
BRCA1-221ENST00000493795 RGPD3A6NKT7 1758 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-221ENST00000493795 TUBGCP6Q96RT7 1819 aa6.12□□□□□ -1.43
BRCA1-221ENST00000493795 C15orf65H3BRN8 121 aa6.12□□□□□ -1.43
BRCA1-221ENST00000493795 MYO7AQ13402 2215 aa6.12□□□□□ -1.43
BRCA1-221ENST00000493795 RP1L1Q8IWN7 2480 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-221ENST00000493795 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
BRCA1-221ENST00000493795 SPRY2O43597 315 aa6.12□□□□□ -1.43
BRCA1-221ENST00000493795 WFDC11Q8NEX6 87 aa6.12□□□□□ -1.43
BRCA1-221ENST00000493795 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 SLURP1P55000 103 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 NDUFV3P56181 108 aaKnown RBP6.11□□□□□ -1.43
BRCA1-221ENST00000493795 DEFB112Q30KQ8 113 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 COL11A1P12107 1806 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-221ENST00000493795 DEFB136Q30KP8 78 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 LYPD6Q86Y78 171 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 ESM1Q9NQ30 184 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 UNC13CQ8NB66 2214 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 J3QKU1 62 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 RPL39P62891 51 aaKnown RBP6.11□□□□□ -1.43
BRCA1-221ENST00000493795 WFDC10BQ8IUB3 73 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 HIGD2AQ9BW72 106 aa6.11□□□□□ -1.43
BRCA1-221ENST00000493795 Q6ZR03 302 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 KLK12Q9UKR0 248 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 KNL1Q8NG31 2342 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 DIAPH2-AS1Q14236 149 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 NFE4Q86UQ8 179 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
BRCA1-221ENST00000493795 C10orf105Q8TEF2 133 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.1□□□□□ -1.43
BRCA1-221ENST00000493795 NDUFC1O43677 76 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 UFSP1Q6NVU6 142 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms