RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 M0R381 172 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 CD5LO43866 347 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 PRSS1P07477 247 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 MCRIP2Q9BUT9 160 aaKnown RBP7.31□□□□□ -1.24
NPHP3-209ENST00000493732 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 IGLV2-18A0A075B6J9 118 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 KIR3DS1Q14943 382 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 ORMDL2Q53FV1 153 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 NRACQ8N912 160 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 TMEM158Q8WZ71 300 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 ODF3Q96PU9 254 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 PKD1L2Q7Z442 2459 aa7.31□□□□□ -1.24
NPHP3-209ENST00000493732 CACNA1BQ00975 2339 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 AKAP6Q13023 2319 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 AVPP01185 164 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 ELANEP08246 267 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 NPSP0C0P6 89 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 SMIM17P0DL12 118 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 DEFB112Q30KQ8 113 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 AP1S3Q96PC3 154 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
NPHP3-209ENST00000493732 DOPEY1Q5JWR5 2465 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 ITPR1Q14643 2758 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 CACNA1AO00555 2505 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 A1L4Q6 167 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 DPM2O94777 84 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 IGKCP01834 107 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 HLA-DRB4P13762 266 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
NPHP3-209ENST00000493732 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 SNRPD3P62318 126 aaKnown RBP7.29□□□□□ -1.24
NPHP3-209ENST00000493732 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 TMEM97Q5BJF2 176 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 PRR9Q5T870 116 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 HLA-DRB4X5D2U9 266 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 PIEZO1Q92508 2521 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 A6NDN8 102 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 KLLNB2CW77 178 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 LGALS9O00182 355 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 TGFAP01135 160 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 IGHV4-59P01825 116 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 FGF6P10767 208 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 HSD52Q0P140 79 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 ODF1Q14990 250 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 FAM159AQ6UWV7 190 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 Q6ZS46 218 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 C18orf15Q96N68 181 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 VPREB3Q9UKI3 123 aa7.29□□□□□ -1.24
NPHP3-209ENST00000493732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-209ENST00000493732 NXPH4O95158 308 aa7.28□□□□□ -1.24
NPHP3-209ENST00000493732 GATA1P15976 413 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-209ENST00000493732 FXYD7P58549 80 aa7.28□□□□□ -1.24
NPHP3-209ENST00000493732 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
NPHP3-209ENST00000493732 C2orf91Q6ZV80 131 aa7.28□□□□□ -1.24
NPHP3-209ENST00000493732 DCANP1Q8TF63 244 aa7.28□□□□□ -1.24
NPHP3-209ENST00000493732 BEX4Q9NWD9 120 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-209ENST00000493732 A0A096LNT2 108 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 J3KRW8 73 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 GAS8-AS1O95177 125 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 PLNP26678 52 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
NPHP3-209ENST00000493732 LRRC75A-AS1Q8N1F1 130 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 POM121L12Q8N7R1 296 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 DKK2Q9UBU2 259 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 TAX1BP3O14907 124 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 CIDEAO60543 219 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 DUSP14O95147 198 aaKnown RBP7.27□□□□□ -1.25
NPHP3-209ENST00000493732 LGALS1P09382 135 aaKnown RBP7.27□□□□□ -1.25
NPHP3-209ENST00000493732 VAMP3Q15836 100 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 Q6YL49 198 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 UBE2E2Q96LR5 201 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 FOXC2Q99958 501 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 HIGD1BQ9P298 99 aa7.27□□□□□ -1.25
NPHP3-209ENST00000493732 A0A087WX48 190 aa7.26□□□□□ -1.25
NPHP3-209ENST00000493732 FSHBP01225 129 aa7.26□□□□□ -1.25
NPHP3-209ENST00000493732 NMUP48645 174 aa7.26□□□□□ -1.25
NPHP3-209ENST00000493732 TEX29Q8N6K0 151 aa7.26□□□□□ -1.25
NPHP3-209ENST00000493732 HHLA3Q9XRX5 114 aa7.26□□□□□ -1.25
NPHP3-209ENST00000493732 IGKV3-7A0A075B6H7 116 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 IGHV4OR15-8A0A075B7B6 117 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 A0A087WW49 117 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 C7orf71A4D174 169 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 F6UB75 175 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 RNASE3P12724 160 aaKnown RBP7.25□□□□□ -1.25
NPHP3-209ENST00000493732 LCNL1Q6ZST4 164 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 C14orf178Q8N769 122 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-209ENST00000493732 RNF152Q8N8N0 203 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 TOMM6Q96B49 74 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 SPTAN1Q13813 2472 aaKnown RBP7.25□□□□□ -1.25
NPHP3-209ENST00000493732 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.25□□□□□ -1.25
NPHP3-209ENST00000493732 H7C1H1 209 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 Q6ZQT7 251 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 WFDC3Q8IUB2 231 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
NPHP3-209ENST00000493732 RASL10AQ92737 203 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms