RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 RPS20P60866 119 aaKnown RBP9.27□□□□□ -0.93
VPS52-220ENST00000493674 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
VPS52-220ENST00000493674 TDRG1Q3Y452 100 aa9.27□□□□□ -0.93
VPS52-220ENST00000493674 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
VPS52-220ENST00000493674 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
VPS52-220ENST00000493674 NEU1Q99519 415 aa9.27□□□□□ -0.93
VPS52-220ENST00000493674 C20orf144Q9BQM9 153 aa9.27□□□□□ -0.93
VPS52-220ENST00000493674 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
VPS52-220ENST00000493674 J3KRW8 73 aa9.26□□□□□ -0.93
VPS52-220ENST00000493674 KCNIP4Q6PIL6 250 aa9.26□□□□□ -0.93
VPS52-220ENST00000493674 DEFB125Q8N687 156 aa9.26□□□□□ -0.93
VPS52-220ENST00000493674 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
VPS52-220ENST00000493674 TGIF2-C20orf24A0A0A6YYL0 155 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 TRAV12-3A0A0B4J271 114 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 ORM1P02763 201 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 TYMSP04818 313 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 GZMBP10144 247 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 S100PP25815 95 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 CTRLP40313 264 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 FAM3BP58499 235 aaPredicted RBP9.25□□□□□ -0.93
VPS52-220ENST00000493674 FXYD7P58549 80 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
VPS52-220ENST00000493674 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 LINC00467Q9BRT7 94 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 NAT8BQ9UHF3 227 aa9.25□□□□□ -0.93
VPS52-220ENST00000493674 A0A1W2PPQ1 181 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 XKRY2A2RUG3 117 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 HIGD1CA8MV81 97 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 INSP01308 110 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 TCL1AP56279 114 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 SSBP4Q9BWG4 385 aaPredicted RBP9.24□□□□□ -0.93
VPS52-220ENST00000493674 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 SRD5A3Q9H8P0 318 aa9.24□□□□□ -0.93
VPS52-220ENST00000493674 ZMAT5Q9UDW3 170 aaKnown RBP9.24□□□□□ -0.93
VPS52-220ENST00000493674 TMSB15BA0A087X1C1 80 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 G3V4G9 280 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 SNAI2O43623 268 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 MED14OSP0DP75 135 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 NUTF2P61970 127 aaKnown RBP9.23□□□□□ -0.93
VPS52-220ENST00000493674 KPRPQ5T749 579 aaPredicted RBP9.23□□□□□ -0.93
VPS52-220ENST00000493674 CSNK1G2-AS1Q8NCQ2 148 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 BTF3L4Q96K17 158 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 KCNS1Q96KK3 526 aa9.23□□□□□ -0.93
VPS52-220ENST00000493674 IGHV1OR15-1A0A075B7D0 117 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 A8MZ25 164 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 OR5AL1P0C617 328 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 RPL35AP18077 110 aaKnown RBP9.22□□□□□ -0.93
VPS52-220ENST00000493674 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 C1orf158Q8N1D5 194 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 TMEM256Q8N2U0 113 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 FAM210BQ96KR6 192 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 SCRT2Q9NQ03 307 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
VPS52-220ENST00000493674 GRIFINA4D1Z8 144 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 RAB5AP20339 215 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 FAM159AQ6UWV7 190 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 FER1L6-AS1Q8NA97 138 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 GATD1Q8NB37 220 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 NAGKQ9UJ70 344 aa9.21□□□□□ -0.94
VPS52-220ENST00000493674 IGHV4-4A0A075B6R2 117 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 KIR2DL5BA0A0G2JN68 375 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 KIR2DL5BA0A0G2JPC4 375 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 F2Z2F3 143 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 FRMD6-AS1P0C7T7 363 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 RNASE3P12724 160 aaKnown RBP9.2□□□□□ -0.94
VPS52-220ENST00000493674 WDR73Q6P4I2 378 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 RASL11AQ6T310 242 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 LYZL1Q6UWQ5 148 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 KIR2DL5AQ8N109 375 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 PGLYRP4Q96LB8 373 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 TP53TG3Q9ULZ0 132 aa9.2□□□□□ -0.94
VPS52-220ENST00000493674 LOC102724200A0A096LPH7 203 aaPredicted RBP9.19□□□□□ -0.94
VPS52-220ENST00000493674 A0A1B0GUT8 65 aa9.19□□□□□ -0.94
VPS52-220ENST00000493674 GNRH2O43555 120 aa9.19□□□□□ -0.94
VPS52-220ENST00000493674 NXPH4O95158 308 aa9.19□□□□□ -0.94
VPS52-220ENST00000493674 ARMS2P0C7Q2 107 aa9.19□□□□□ -0.94
VPS52-220ENST00000493674 ASIPP42127 132 aa9.19□□□□□ -0.94
VPS52-220ENST00000493674 ZNF705AQ6ZN79 300 aaPredicted RBP9.19□□□□□ -0.94
VPS52-220ENST00000493674 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
VPS52-220ENST00000493674 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
VPS52-220ENST00000493674 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 A0A1B0GW15 77 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 H3BVH4 76 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 PHOX2AO14813 284 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 CTAG1AP78358 180 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 COX19Q49B96 90 aa9.18□□□□□ -0.94
VPS52-220ENST00000493674 MRPL54Q6P161 138 aaKnown RBP9.18□□□□□ -0.94
VPS52-220ENST00000493674 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 SPINK4O60575 86 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 HBBP68871 147 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
VPS52-220ENST00000493674 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms