RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TDRG1Q3Y452 100 aa9.98□□□□□ -0.81
ATG4B-223ENST00000493618 WFDC10BQ8IUB3 73 aa9.98□□□□□ -0.81
ATG4B-223ENST00000493618 IQCF2Q8IXL9 164 aa9.98□□□□□ -0.81
ATG4B-223ENST00000493618 OR4C5Q8NGB2 326 aa9.98□□□□□ -0.81
ATG4B-223ENST00000493618 M0R2P5 195 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 STAG3L2P0CL84 134 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 STAG3L3P0CL85 134 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 ATP6V0CP27449 155 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 Q5BKY6 102 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 MED28Q9H204 178 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 SH3BGRL3Q9H299 93 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
ATG4B-223ENST00000493618 GCHFRP30047 84 aa9.96□□□□□ -0.82
ATG4B-223ENST00000493618 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
ATG4B-223ENST00000493618 ASB13Q8WXK3 278 aa9.96□□□□□ -0.82
ATG4B-223ENST00000493618 RAB24Q969Q5 203 aa9.96□□□□□ -0.82
ATG4B-223ENST00000493618 LY96Q9Y6Y9 160 aa9.96□□□□□ -0.82
ATG4B-223ENST00000493618 C9JCJ5 164 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 ORM1P02763 201 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 TCRAP04437 139 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 TMEM75Q8N9X5 138 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 OR2G3Q8NGZ4 309 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 AQP10Q96PS8 301 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 NDFIP1Q9BT67 221 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 C11orf21Q9P2W6 132 aa9.95□□□□□ -0.82
ATG4B-223ENST00000493618 DNAH10OSP0CZ25 163 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 ERVFC1-1P60608 527 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 PRNTQ86SH4 94 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 NHLRC2Q8NBF2 726 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 TXNDC17Q9BRA2 123 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 PSMG3Q9BT73 122 aaPredicted RBP9.94□□□□□ -0.82
ATG4B-223ENST00000493618 BATF3Q9NR55 127 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 PSG8Q9UQ74 426 aa9.94□□□□□ -0.82
ATG4B-223ENST00000493618 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
ATG4B-223ENST00000493618 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
ATG4B-223ENST00000493618 PTTG1O95997 202 aa9.93□□□□□ -0.82
ATG4B-223ENST00000493618 GCGP01275 180 aa9.93□□□□□ -0.82
ATG4B-223ENST00000493618 SUMO1P63165 101 aaKnown RBP9.93□□□□□ -0.82
ATG4B-223ENST00000493618 SUN5Q8TC36 379 aa9.93□□□□□ -0.82
ATG4B-223ENST00000493618 SCRT2Q9NQ03 307 aa9.93□□□□□ -0.82
ATG4B-223ENST00000493618 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 K7EQM0 130 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 EREGO14944 169 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 CXorf1O96002 111 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 IGLV2-11P01706 119 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 GATA1P15976 413 aaPredicted RBP9.92□□□□□ -0.82
ATG4B-223ENST00000493618 RPL7L1Q6DKI1 246 aaKnown RBP9.92□□□□□ -0.82
ATG4B-223ENST00000493618 DPPA3Q6W0C5 159 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 Q8N1X5 172 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
ATG4B-223ENST00000493618 MSRB1Q9NZV6 116 aa9.92□□□□□ -0.82
ATG4B-223ENST00000493618 FXYD6-FXYD2A0A087WZ82 144 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
ATG4B-223ENST00000493618 TAAR5O14804 337 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 MBP02144 154 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 EVI2AP22794 236 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 PPT1P50897 306 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 SERF2P84101 59 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 FLI1Q01543 452 aaPredicted RBP9.91□□□□□ -0.82
ATG4B-223ENST00000493618 ZNF876PQ49A33 203 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 TMEM167BQ9NRX6 74 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 EPDR1Q9UM22 224 aa9.91□□□□□ -0.82
ATG4B-223ENST00000493618 A0A087WTM6 91 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 TRAV34A0A0B4J273 112 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 RNF222A6NCQ9 220 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 PGPEP1LA6NFU8 196 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 RS1O15537 224 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 CRYGDP07320 174 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 GIPP09681 153 aaPredicted RBP9.9□□□□□ -0.82
ATG4B-223ENST00000493618 UBE2G2P60604 165 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 ZNF726P1Q15940 193 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 ZFP69Q49AA0 526 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 SMUG1Q53HV7 270 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 CYB561D1Q8N8Q1 229 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 INO80EQ8NBZ0 244 aaPredicted RBP9.9□□□□□ -0.82
ATG4B-223ENST00000493618 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 TNFSF18Q9UNG2 199 aa9.9□□□□□ -0.82
ATG4B-223ENST00000493618 PFN1P07737 140 aaKnown RBP9.89□□□□□ -0.83
ATG4B-223ENST00000493618 ZNF506Q5JVG8 444 aa9.89□□□□□ -0.83
ATG4B-223ENST00000493618 C9orf85Q96MD7 179 aa9.89□□□□□ -0.83
ATG4B-223ENST00000493618 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
ATG4B-223ENST00000493618 FGF8P55075 233 aaPredicted RBP9.88□□□□□ -0.83
ATG4B-223ENST00000493618 BORCS7-ASMTA0A0B4J1R7 106 aa9.87□□□□□ -0.83
ATG4B-223ENST00000493618 RNASE3P12724 160 aaKnown RBP9.87□□□□□ -0.83
ATG4B-223ENST00000493618 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
ATG4B-223ENST00000493618 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
ATG4B-223ENST00000493618 ARL2-SNX15V9GYD0 113 aa9.87□□□□□ -0.83
ATG4B-223ENST00000493618 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
ATG4B-223ENST00000493618 CTXND1A0A1B0GTU2 59 aa9.86□□□□□ -0.83
ATG4B-223ENST00000493618 A0A1W2PRE2 83 aa9.86□□□□□ -0.83
ATG4B-223ENST00000493618 IFNA7P01567 189 aa9.86□□□□□ -0.83
ATG4B-223ENST00000493618 IGHV3-30P01768 117 aa9.86□□□□□ -0.83
ATG4B-223ENST00000493618 IGHV3-33P01772 117 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms