RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 A0A1W2PRE2 83 aa18.72■□□□□ 0.59
SH3GL3-204ENST00000492099 FBLL1A6NHQ2 334 aaKnown RBP18.72■□□□□ 0.59
SH3GL3-204ENST00000492099 ARPC5O15511 151 aa18.72■□□□□ 0.59
SH3GL3-204ENST00000492099 AKR1C8PQ5T2L2 129 aa18.72■□□□□ 0.59
SH3GL3-204ENST00000492099 CYB561D1Q8N8Q1 229 aa18.72■□□□□ 0.59
SH3GL3-204ENST00000492099 TRGV4A0A0C4DH28 118 aa18.71■□□□□ 0.59
SH3GL3-204ENST00000492099 ZNF726P1Q15940 193 aa18.71■□□□□ 0.59
SH3GL3-204ENST00000492099 C8orf49Q96NF6 230 aa18.71■□□□□ 0.59
SH3GL3-204ENST00000492099 M0R2P5 195 aa18.7■□□□□ 0.58
SH3GL3-204ENST00000492099 TYMSP04818 313 aa18.7■□□□□ 0.58
SH3GL3-204ENST00000492099 FLI1Q01543 452 aaPredicted RBP18.7■□□□□ 0.58
SH3GL3-204ENST00000492099 TMEM75Q8N9X5 138 aa18.7■□□□□ 0.58
SH3GL3-204ENST00000492099 A0A1W2PPQ1 181 aa18.69■□□□□ 0.58
SH3GL3-204ENST00000492099 IGLV2-11P01706 119 aa18.69■□□□□ 0.58
SH3GL3-204ENST00000492099 MRPL23Q16540 153 aaKnown RBP18.69■□□□□ 0.58
SH3GL3-204ENST00000492099 ZFP69Q49AA0 526 aa18.69■□□□□ 0.58
SH3GL3-204ENST00000492099 ZNF479Q96JC4 524 aa18.69■□□□□ 0.58
SH3GL3-204ENST00000492099 SFTA3P0C7M3 94 aa18.68■□□□□ 0.58
SH3GL3-204ENST00000492099 SMUG1Q53HV7 270 aa18.68■□□□□ 0.58
SH3GL3-204ENST00000492099 SAPCD1Q5SSQ6 148 aa18.68■□□□□ 0.58
SH3GL3-204ENST00000492099 CYTL1Q9NRR1 136 aa18.68■□□□□ 0.58
SH3GL3-204ENST00000492099 TRAV4A0A0B4J268 109 aa18.67■□□□□ 0.58
SH3GL3-204ENST00000492099 PFN1P07737 140 aaKnown RBP18.67■□□□□ 0.58
SH3GL3-204ENST00000492099 PRNTQ86SH4 94 aa18.67■□□□□ 0.58
SH3GL3-204ENST00000492099 NKX6-2Q9C056 277 aaPredicted RBP18.67■□□□□ 0.58
SH3GL3-204ENST00000492099 GCGP01275 180 aa18.66■□□□□ 0.58
SH3GL3-204ENST00000492099 ZNF80P51504 273 aaPredicted RBP18.66■□□□□ 0.58
SH3GL3-204ENST00000492099 OR4C5Q8NGB2 326 aa18.66■□□□□ 0.58
SH3GL3-204ENST00000492099 PKD1P98161 4303 aa18.66■□□□□ 0.58
SH3GL3-204ENST00000492099 IFNA7P01567 189 aa18.65■□□□□ 0.58
SH3GL3-204ENST00000492099 BTF3P20290 206 aaKnown RBP18.65■□□□□ 0.58
SH3GL3-204ENST00000492099 TNP2Q05952 138 aa18.65■□□□□ 0.58
SH3GL3-204ENST00000492099 NEGR1Q7Z3B1 354 aa18.65■□□□□ 0.58
SH3GL3-204ENST00000492099 PKHD1P08F94 4074 aa18.65■□□□□ 0.58
SH3GL3-204ENST00000492099 SMLR1H3BR10 107 aa18.64■□□□□ 0.57
SH3GL3-204ENST00000492099 ORM1P02763 201 aa18.64■□□□□ 0.57
SH3GL3-204ENST00000492099 PPT1P50897 306 aa18.64■□□□□ 0.57
SH3GL3-204ENST00000492099 FGF8P55075 233 aaPredicted RBP18.64■□□□□ 0.57
SH3GL3-204ENST00000492099 KRTAP1-5Q9BYS1 174 aa18.64■□□□□ 0.57
SH3GL3-204ENST00000492099 UBE2G2P60604 165 aa18.63■□□□□ 0.57
SH3GL3-204ENST00000492099 ZNF345Q14585 488 aa18.63■□□□□ 0.57
SH3GL3-204ENST00000492099 PCNPQ8WW12 178 aaKnown RBP18.63■□□□□ 0.57
SH3GL3-204ENST00000492099 C11orf21Q9P2W6 132 aa18.63■□□□□ 0.57
SH3GL3-204ENST00000492099 HERC2O95714 4834 aa18.63■□□□□ 0.57
SH3GL3-204ENST00000492099 FAM74A7A6NL05 159 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 SIVA1O15304 175 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 MED14OSP0DP75 135 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 LYPD5Q6UWN5 251 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 KCNRGQ8N5I3 272 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 HIST1H2BAQ96A08 127 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 LINC00479Q96M42 142 aa18.62■□□□□ 0.57
SH3GL3-204ENST00000492099 KIAA1109Q2LD37 5005 aa18.61■□□□□ 0.57
SH3GL3-204ENST00000492099 MAP1LC3B2A6NCE7 125 aa18.61■□□□□ 0.57
SH3GL3-204ENST00000492099 K7EQD1 137 aa18.61■□□□□ 0.57
SH3GL3-204ENST00000492099 SRIP30626 198 aa18.61■□□□□ 0.57
SH3GL3-204ENST00000492099 MAP1LC3BQ9GZQ8 125 aa18.61■□□□□ 0.57
SH3GL3-204ENST00000492099 TRAV34A0A0B4J273 112 aa18.6■□□□□ 0.57
SH3GL3-204ENST00000492099 C9JCJ5 164 aa18.6■□□□□ 0.57
SH3GL3-204ENST00000492099 PEX7O00628 323 aa18.6■□□□□ 0.57
SH3GL3-204ENST00000492099 NXPH4O95158 308 aa18.6■□□□□ 0.57
SH3GL3-204ENST00000492099 GYPEP15421 78 aa18.6■□□□□ 0.57
SH3GL3-204ENST00000492099 STOML3Q8TAV4 291 aa18.6■□□□□ 0.57
SH3GL3-204ENST00000492099 DNAH11Q96DT5 4516 aa18.59■□□□□ 0.57
SH3GL3-204ENST00000492099 HMSDA8MTL9 139 aa18.59■□□□□ 0.57
SH3GL3-204ENST00000492099 ZNF876PQ49A33 203 aa18.59■□□□□ 0.57
SH3GL3-204ENST00000492099 ARL2-SNX15V9GYD0 113 aa18.59■□□□□ 0.57
SH3GL3-204ENST00000492099 CIDEAO60543 219 aa18.58■□□□□ 0.56
SH3GL3-204ENST00000492099 C9orf85Q96MD7 179 aa18.58■□□□□ 0.56
SH3GL3-204ENST00000492099 TXNDC17Q9BRA2 123 aa18.58■□□□□ 0.56
SH3GL3-204ENST00000492099 A0A0D9SG52 128 aa18.57■□□□□ 0.56
SH3GL3-204ENST00000492099 PTH2Q96A98 100 aa18.57■□□□□ 0.56
SH3GL3-204ENST00000492099 FABP5P3A8MUU1 101 aa18.56■□□□□ 0.56
SH3GL3-204ENST00000492099 SEC11BP0C7V7 166 aa18.56■□□□□ 0.56
SH3GL3-204ENST00000492099 OR11H4Q8NGC9 324 aa18.56■□□□□ 0.56
SH3GL3-204ENST00000492099 DYNC1H1Q14204 4646 aaKnown RBP18.56■□□□□ 0.56
SH3GL3-204ENST00000492099 GATA1P15976 413 aaPredicted RBP18.55■□□□□ 0.56
SH3GL3-204ENST00000492099 SH2D6Q7Z4S9 175 aa18.55■□□□□ 0.56
SH3GL3-204ENST00000492099 Q86TA4 180 aa18.55■□□□□ 0.56
SH3GL3-204ENST00000492099 TCEAL7Q9BRU2 100 aa18.55■□□□□ 0.56
SH3GL3-204ENST00000492099 UMAD1C9J7I0 102 aa18.54■□□□□ 0.56
SH3GL3-204ENST00000492099 RS1O15537 224 aa18.54■□□□□ 0.56
SH3GL3-204ENST00000492099 FHITP49789 147 aa18.54■□□□□ 0.56
SH3GL3-204ENST00000492099 ZNF575Q86XF7 245 aa18.54■□□□□ 0.56
SH3GL3-204ENST00000492099 ZFP30Q9Y2G7 519 aa18.54■□□□□ 0.56
SH3GL3-204ENST00000492099 KANTRA0A1W2PQU2 76 aa18.53■□□□□ 0.56
SH3GL3-204ENST00000492099 RNASE3P12724 160 aaKnown RBP18.53■□□□□ 0.56
SH3GL3-204ENST00000492099 CFAP126Q5VTH2 177 aa18.53■□□□□ 0.56
SH3GL3-204ENST00000492099 IGKV3D-20A0A0C4DH25 116 aa18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 BCL2L11O43521 198 aa18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 S100A4P26447 101 aaKnown RBP18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 LINC00315P59091 139 aa18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 CST9LP1Q5W188 147 aa18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 FMC1Q96HJ9 113 aa18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 ZNF471Q9BX82 626 aaPredicted RBP18.52■□□□□ 0.56
SH3GL3-204ENST00000492099 TRAV9-2A0A087WT02 112 aa18.51■□□□□ 0.55
SH3GL3-204ENST00000492099 PGPEP1LA6NFU8 196 aa18.51■□□□□ 0.55
SH3GL3-204ENST00000492099 UBE2G1P62253 170 aa18.51■□□□□ 0.55
SH3GL3-204ENST00000492099 EIF5AP63241 154 aaKnown RBP18.51■□□□□ 0.55
SH3GL3-204ENST00000492099 ZNF506Q5JVG8 444 aa18.51■□□□□ 0.55
SH3GL3-204ENST00000492099 DPPA3Q6W0C5 159 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms