RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 TRAV9-2A0A087WT02 112 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 TRAV21A0A0B4J279 112 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 K7EQD1 137 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 EREGO14944 169 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 ARL14EPLP0DKL9 152 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 XGP55808 180 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 ERVFC1-1P60608 527 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 ZNF479Q96JC4 524 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
PBX3-209ENST00000491787 A0A087WTM6 91 aa11.71□□□□□ -0.53
PBX3-209ENST00000491787 TRGV4A0A0C4DH28 118 aa11.71□□□□□ -0.53
PBX3-209ENST00000491787 ATP6V0CP27449 155 aa11.71□□□□□ -0.53
PBX3-209ENST00000491787 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
PBX3-209ENST00000491787 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
PBX3-209ENST00000491787 TREM1Q9NP99 234 aa11.71□□□□□ -0.53
PBX3-209ENST00000491787 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
PBX3-209ENST00000491787 ORM1P02763 201 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 SFTA3P0C7M3 94 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 DNAH10OSP0CZ25 163 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 GCHFRP30047 84 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
PBX3-209ENST00000491787 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 TMEM167BQ9NRX6 74 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 LY96Q9Y6Y9 160 aa11.7□□□□□ -0.54
PBX3-209ENST00000491787 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 K7EQM0 130 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 CXorf1O96002 111 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 GYPEP15421 78 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 SRIP30626 198 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
PBX3-209ENST00000491787 TRAV4A0A0B4J268 109 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 FBLL1A6NHQ2 334 aaKnown RBP11.68□□□□□ -0.54
PBX3-209ENST00000491787 EPM2AB3EWF7 344 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 M0R2P5 195 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 TCRAP04437 139 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.54
PBX3-209ENST00000491787 TIRAPP58753 221 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 GNG5P63218 68 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 ACTR3CQ9C0K3 210 aaPredicted RBP11.68□□□□□ -0.54
PBX3-209ENST00000491787 SDF2L1Q9HCN8 221 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
PBX3-209ENST00000491787 DNAH8Q96JB1 4490 aa11.67□□□□□ -0.54
PBX3-209ENST00000491787 BORCS7-ASMTA0A0B4J1R7 106 aa11.67□□□□□ -0.54
PBX3-209ENST00000491787 F6UZH7 168 aa11.67□□□□□ -0.54
PBX3-209ENST00000491787 Q5BKY6 102 aa11.67□□□□□ -0.54
PBX3-209ENST00000491787 PCNPQ8WW12 178 aaKnown RBP11.67□□□□□ -0.54
PBX3-209ENST00000491787 TXNDC17Q9BRA2 123 aa11.67□□□□□ -0.54
PBX3-209ENST00000491787 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
PBX3-209ENST00000491787 GNRH2O43555 120 aa11.66□□□□□ -0.54
PBX3-209ENST00000491787 TYMSP04818 313 aa11.66□□□□□ -0.54
PBX3-209ENST00000491787 EVI2AP22794 236 aa11.66□□□□□ -0.54
PBX3-209ENST00000491787 KRTAP10-1P60331 282 aa11.66□□□□□ -0.54
PBX3-209ENST00000491787 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
PBX3-209ENST00000491787 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 C9JCJ5 164 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 TAAR5O14804 337 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 CYB561D1Q8N8Q1 229 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 EPDR1Q9UM22 224 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 PSG8Q9UQ74 426 aa11.65□□□□□ -0.54
PBX3-209ENST00000491787 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
PBX3-209ENST00000491787 FXYD6-FXYD2A0A087WZ82 144 aa11.64□□□□□ -0.55
PBX3-209ENST00000491787 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
PBX3-209ENST00000491787 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
PBX3-209ENST00000491787 GATA1P15976 413 aaPredicted RBP11.64□□□□□ -0.55
PBX3-209ENST00000491787 SUMO1P63165 101 aaKnown RBP11.64□□□□□ -0.55
PBX3-209ENST00000491787 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
PBX3-209ENST00000491787 RPL7L1Q6DKI1 246 aaKnown RBP11.64□□□□□ -0.55
PBX3-209ENST00000491787 C10orf126Q8N4M7 172 aa11.64□□□□□ -0.55
PBX3-209ENST00000491787 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
PBX3-209ENST00000491787 OR2T35Q8NGX2 323 aa11.64□□□□□ -0.55
PBX3-209ENST00000491787 CIDEAO60543 219 aa11.63□□□□□ -0.55
PBX3-209ENST00000491787 IGLV2-11P01706 119 aa11.63□□□□□ -0.55
PBX3-209ENST00000491787 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
PBX3-209ENST00000491787 SMUG1Q53HV7 270 aa11.63□□□□□ -0.55
PBX3-209ENST00000491787 SAPCD1Q5SSQ6 148 aa11.63□□□□□ -0.55
PBX3-209ENST00000491787 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
PBX3-209ENST00000491787 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
PBX3-209ENST00000491787 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
PBX3-209ENST00000491787 GCGP01275 180 aa11.62□□□□□ -0.55
PBX3-209ENST00000491787 CRYGDP07320 174 aa11.62□□□□□ -0.55
PBX3-209ENST00000491787 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
PBX3-209ENST00000491787 PTH2Q96A98 100 aa11.62□□□□□ -0.55
PBX3-209ENST00000491787 SRRM2Q9UQ35 2752 aaKnown RBP11.62□□□□□ -0.55
PBX3-209ENST00000491787 MYCBP2O75592 4640 aa11.61□□□□□ -0.55
PBX3-209ENST00000491787 LRCOL1A6NCL2 159 aa11.61□□□□□ -0.55
PBX3-209ENST00000491787 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
PBX3-209ENST00000491787 LINC01556Q5JQF7 62 aa11.61□□□□□ -0.55
PBX3-209ENST00000491787 NKX6-2Q9C056 277 aaPredicted RBP11.61□□□□□ -0.55
PBX3-209ENST00000491787 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
PBX3-209ENST00000491787 IGHV3-38A0A0C4DH36 116 aa11.6□□□□□ -0.55
PBX3-209ENST00000491787 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms