RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	SERTM2	A0A1B0GWG4	89 aa		12.15	□□□□□ -0.46
GGA1-223	ENST00000491295	IFITM3	Q01628	133 aa		12.15	□□□□□ -0.46
GGA1-223	ENST00000491295	WFDC10B	Q8IUB3	73 aa		12.15	□□□□□ -0.46
GGA1-223	ENST00000491295	SDF2L1	Q9HCN8	221 aa		12.15	□□□□□ -0.46
GGA1-223	ENST00000491295	TREM1	Q9NP99	234 aa		12.15	□□□□□ -0.46
GGA1-223	ENST00000491295	NAGK	Q9UJ70	344 aa		12.15	□□□□□ -0.46
GGA1-223	ENST00000491295	APOB	P04114	4563 aa	Known RBP	12.15	□□□□□ -0.47
GGA1-223	ENST00000491295	GNRH2	O43555	120 aa		12.14	□□□□□ -0.47
GGA1-223	ENST00000491295	DEFA1	P59665	94 aa		12.14	□□□□□ -0.47
GGA1-223	ENST00000491295	DEFA3	P59666	94 aa		12.14	□□□□□ -0.47
GGA1-223	ENST00000491295	GOLT1A	Q6ZVE7	132 aa		12.14	□□□□□ -0.47
GGA1-223	ENST00000491295	SMIM3	Q9BZL3	60 aa		12.14	□□□□□ -0.47
GGA1-223	ENST00000491295	CRYGD	P07320	174 aa		12.13	□□□□□ -0.47
GGA1-223	ENST00000491295	PFN1	P07737	140 aa	Known RBP	12.12	□□□□□ -0.47
GGA1-223	ENST00000491295	XG	P55808	180 aa		12.12	□□□□□ -0.47
GGA1-223	ENST00000491295	ASB13	Q8WXK3	278 aa		12.12	□□□□□ -0.47
GGA1-223	ENST00000491295	NDFIP1	Q9BT67	221 aa		12.12	□□□□□ -0.47
GGA1-223	ENST00000491295	RPH3AL	Q9UNE2	315 aa		12.12	□□□□□ -0.47
GGA1-223	ENST00000491295	IGHV3-38	A0A0C4DH36	116 aa		12.11	□□□□□ -0.47
GGA1-223	ENST00000491295	TYMS	P04818	313 aa		12.11	□□□□□ -0.47
GGA1-223	ENST00000491295	GATA1	P15976	413 aa	Predicted RBP	12.11	□□□□□ -0.47
GGA1-223	ENST00000491295	OR10G9	Q8NGN4	311 aa		12.11	□□□□□ -0.47
GGA1-223	ENST00000491295	OR10G7	Q8NGN6	311 aa		12.11	□□□□□ -0.47
GGA1-223	ENST00000491295	TVP23C	Q96ET8	276 aa		12.11	□□□□□ -0.47
GGA1-223	ENST00000491295	WFDC1	Q9HC57	220 aa		12.11	□□□□□ -0.47
GGA1-223	ENST00000491295		K7EQM0	130 aa		12.1	□□□□□ -0.47
GGA1-223	ENST00000491295	NHLRC2	Q8NBF2	726 aa		12.1	□□□□□ -0.47
GGA1-223	ENST00000491295	TRAV8-1	A0A0A6YYK1	113 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	TRBV6-4	A0A1B0GX49	114 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	FBLL1	A6NHQ2	334 aa	Known RBP	12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	TAAR5	O14804	337 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	PPT1	P50897	306 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	ZNF876P	Q49A33	203 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	LINC01556	Q5JQF7	62 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	C5orf17	Q8NAS9	161 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	FRZB	Q92765	325 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	PTH2	Q96A98	100 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	PRADC1	Q9BSG0	188 aa		12.09	□□□□□ -0.47
GGA1-223	ENST00000491295	TRAV8-6	A0A0B4J262	113 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295		A6NHS1	94 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295		F6UZH7	168 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	EIF3G	O75821	320 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	GCSH	P23434	173 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	KRTAP10-1	P60331	282 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	RAB2A	P61019	212 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	OR2G3	Q8NGZ4	309 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	SUN5	Q8TC36	379 aa		12.08	□□□□□ -0.48
GGA1-223	ENST00000491295	LOC100131303	A0A0U1RQF7	123 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	IBA57-AS1	B1ANH7	110 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	PSCA	O43653	123 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	MB	P02144	154 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	STAG3L2	P0CL84	134 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	STAG3L3	P0CL85	134 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	ARL14EPL	P0DKL9	152 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	FUS	P35637	526 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	CDC34	P49427	236 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	RHOH	Q15669	191 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	SLC25A29	Q8N8R3	303 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	NTN5	Q8WTR8	489 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	SH3BGRL3	Q9H299	93 aa		12.07	□□□□□ -0.48
GGA1-223	ENST00000491295	RS1	O15537	224 aa		12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	TCRA	P04437	139 aa		12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	INAFM2	P0DMQ5	153 aa		12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	GNG5	P63218	68 aa		12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	SERF2	P84101	59 aa		12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	CFAP126	Q5VTH2	177 aa		12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	PSMG3	Q9BT73	122 aa	Predicted RBP	12.06	□□□□□ -0.48
GGA1-223	ENST00000491295	HMGB3	O15347	200 aa	Known RBP	12.05	□□□□□ -0.48
GGA1-223	ENST00000491295	ZFP69	Q49AA0	526 aa		12.05	□□□□□ -0.48
GGA1-223	ENST00000491295	TMEM167B	Q9NRX6	74 aa		12.05	□□□□□ -0.48
GGA1-223	ENST00000491295	PSG8	Q9UQ74	426 aa		12.05	□□□□□ -0.48
GGA1-223	ENST00000491295	LRCOL1	A6NCL2	159 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	MGST1	P10620	155 aa	Known RBP	12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	GCHFR	P30047	84 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	SMUG1	Q53HV7	270 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	OR10J3	Q5JRS4	329 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	SAPCD1	Q5SSQ6	148 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	LELP1	Q5T871	98 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	RAB24	Q969Q5	203 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	C9orf85	Q96MD7	179 aa		12.04	□□□□□ -0.48
GGA1-223	ENST00000491295	CXorf1	O96002	111 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	GCG	P01275	180 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	ZNF80	P51504	273 aa	Predicted RBP	12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	SUMO1	P63165	101 aa	Known RBP	12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	FLI1	Q01543	452 aa	Predicted RBP	12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	PIK3CD-AS1	Q5SR53	167 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295		Q5VSD8	79 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	SGK494	Q96LW2	274 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	AQP10	Q96PS8	301 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	TMEM70	Q9BUB7	260 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	GTSF1L	Q9H1H1	148 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	EPDR1	Q9UM22	224 aa		12.03	□□□□□ -0.48
GGA1-223	ENST00000491295	IGLV5-52	A0A0A0MRZ9	124 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	LAGE3	Q14657	143 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	CYB561D1	Q8N8Q1	229 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	TMEM75	Q8N9X5	138 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	HSD17B11	Q8NBQ5	300 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	C11orf21	Q9P2W6	132 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	TNFSF18	Q9UNG2	199 aa		12.02	□□□□□ -0.49
GGA1-223	ENST00000491295	FAM229A	H3BQW9	127 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms