RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 LINC00311Q8N616 119 aa7.65□□□□□ -1.19
ERCC3-208ENST00000491292 RPL39LQ96EH5 51 aaKnown RBP7.65□□□□□ -1.19
ERCC3-208ENST00000491292 PCSK5Q92824 1860 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 WI2-2373I1.2A0A1W2PRP0 233 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 PRSS29PA6NIE9 313 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 DMXL2Q8TDJ6 3036 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 KALRNO60229 2985 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 A0A087WX48 190 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 E9PLD3 99 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 PDE6HQ13956 83 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 C8orf86Q6ZUL3 223 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 AGPAT4-IT1Q9H0P7 198 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 F8VRH5 84 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 IGF2RP11717 2491 aa7.64□□□□□ -1.19
ERCC3-208ENST00000491292 INS-IGF2F8WCM5 200 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 G3V318 75 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 PTPN13Q12923 2485 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 A0A087WWL8 130 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 ZFAND6Q6FIF0 208 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 FAM57AQ8TBR7 257 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 FOXI1Q12951 378 aa7.63□□□□□ -1.19
ERCC3-208ENST00000491292 FCN3O75636 299 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 ASIPP42127 132 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 ORMDL2Q53FV1 153 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 PSMG4Q5JS54 123 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 RNF185Q96GF1 192 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 KIR2DL4Q99706 377 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 HIGD1BQ9P298 99 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 RNF183Q96D59 192 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 RAI1Q7Z5J4 1906 aaPredicted RBP7.62□□□□□ -1.19
ERCC3-208ENST00000491292 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
ERCC3-208ENST00000491292 ZNF672Q499Z4 452 aaPredicted RBP7.62□□□□□ -1.19
ERCC3-208ENST00000491292 TMEM219Q86XT9 240 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 GAGE2BQ13066 116 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 C3orf56Q8N813 242 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 NUP37Q8NFH4 326 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 SMIM2Q9BVW6 85 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
ERCC3-208ENST00000491292 ADGRG4Q8IZF6 3080 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 CEACAM4O75871 244 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 ZNF56Q15929 161 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 LINC00574Q9H8X3 128 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 ADARB2-AS1A8MUL3 147 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 B9A039 149 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 F6UB75 175 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 SETD2Q9BYW2 2564 aaPredicted RBP7.61□□□□□ -1.19
ERCC3-208ENST00000491292 MAP1AP78559 2803 aaPredicted RBP7.61□□□□□ -1.19
ERCC3-208ENST00000491292 LY6EQ16553 131 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 PRR30Q53SZ7 412 aaPredicted RBP7.61□□□□□ -1.19
ERCC3-208ENST00000491292 C16orf54Q6UWD8 224 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 TM2D2Q9BX73 214 aa7.61□□□□□ -1.19
ERCC3-208ENST00000491292 DMDP11532 3685 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 IGKV3D-20A0A0C4DH25 116 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 IGLV1-47P01700 117 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 C1QTNF4Q9BXJ3 329 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 TP53TG1Q9Y2A0 90 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 MYO9AB2RTY4 2548 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 IGF1P05019 195 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 CTSGP08311 255 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 LGALS1P09382 135 aaKnown RBP7.6□□□□□ -1.19
ERCC3-208ENST00000491292 PPDPFLQ8WWR9 84 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 FOXC1Q12948 553 aa7.6□□□□□ -1.19
ERCC3-208ENST00000491292 PTPRQQ9UMZ3 2332 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 GNRH2O43555 120 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 DUSP14O95147 198 aaKnown RBP7.59□□□□□ -1.19
ERCC3-208ENST00000491292 IGLC6P0CF74 106 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 PF4V1P10720 104 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 SCGB1A1P11684 91 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 U3KQK5 164 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 THBDP07204 575 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 ZNF48Q96MX3 618 aaPredicted RBP7.59□□□□□ -1.19
ERCC3-208ENST00000491292 SLC50A1Q9BRV3 221 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 MRGPRG-AS1Q2M3A8 158 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 VMO1Q7Z5L0 202 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.19
ERCC3-208ENST00000491292 TRAV12-3A0A0B4J271 114 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 CD7P09564 240 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 RPL39P62891 51 aaKnown RBP7.58□□□□□ -1.2
ERCC3-208ENST00000491292 FAM159AQ6UWV7 190 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 OR11H6Q8NGC7 330 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 LINC00477Q96M19 166 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 TCF15Q12870 199 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 TAL2Q16559 108 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
ERCC3-208ENST00000491292 EEF1AKMT3Q96AZ1 226 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 DPH3P1Q9H4G8 78 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 ATP6V0E1O15342 81 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 XGP55808 180 aa7.58□□□□□ -1.2
ERCC3-208ENST00000491292 TRPT1Q86TN4 253 aaKnown RBP7.58□□□□□ -1.2
ERCC3-208ENST00000491292 IGHV3-73A0A0B4J1V6 119 aa7.57□□□□□ -1.2
ERCC3-208ENST00000491292 Q6ZUT4 128 aa7.57□□□□□ -1.2
ERCC3-208ENST00000491292 SMAD5-AS1Q9Y6J3 95 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms