RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 EREGO14944 169 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 GNRH2O43555 120 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 ORM1P02763 201 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 TYMSP04818 313 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 NFE4Q86UQ8 179 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 TREM1Q9NP99 234 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 TRAV9-2A0A087WT02 112 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 LOC100131303A0A0U1RQF7 123 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 C9JCJ5 164 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 ARL14EPLP0DKL9 152 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 ARL6IP6Q8N6S5 226 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 OR4C5Q8NGB2 326 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 TXNDC17Q9BRA2 123 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 SDF2L1Q9HCN8 221 aa9.26□□□□□ -0.93
COL6A3-211ENST00000491233 EVI2AP22794 236 aa9.25□□□□□ -0.93
COL6A3-211ENST00000491233 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
COL6A3-211ENST00000491233 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
COL6A3-211ENST00000491233 HSD17B11Q8NBQ5 300 aa9.25□□□□□ -0.93
COL6A3-211ENST00000491233 SGK494Q96LW2 274 aa9.25□□□□□ -0.93
COL6A3-211ENST00000491233 MSRB1Q9NZV6 116 aa9.25□□□□□ -0.93
COL6A3-211ENST00000491233 ALG5Q9Y673 324 aa9.25□□□□□ -0.93
COL6A3-211ENST00000491233 A0A087WTM6 91 aa9.24□□□□□ -0.93
COL6A3-211ENST00000491233 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
COL6A3-211ENST00000491233 KCNS1Q96KK3 526 aa9.24□□□□□ -0.93
COL6A3-211ENST00000491233 NDFIP1Q9BT67 221 aa9.24□□□□□ -0.93
COL6A3-211ENST00000491233 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
COL6A3-211ENST00000491233 K7EP13 123 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 GATA1P15976 413 aaPredicted RBP9.23□□□□□ -0.93
COL6A3-211ENST00000491233 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 NHLRC2Q8NBF2 726 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 OR2G3Q8NGZ4 309 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 ASB13Q8WXK3 278 aa9.23□□□□□ -0.93
COL6A3-211ENST00000491233 SERTM2A0A1B0GWG4 89 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 FBLL1A6NHQ2 334 aaKnown RBP9.22□□□□□ -0.93
COL6A3-211ENST00000491233 TCRAP04437 139 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 CRYGDP07320 174 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 ATP6V0CP27449 155 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 GCHFRP30047 84 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 PPT1P50897 306 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 ZNF80P51504 273 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-211ENST00000491233 RAB24Q969Q5 203 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 PSMG3Q9BT73 122 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-211ENST00000491233 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
COL6A3-211ENST00000491233 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.94
COL6A3-211ENST00000491233 C10orf126Q8N4M7 172 aa9.21□□□□□ -0.94
COL6A3-211ENST00000491233 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.94
COL6A3-211ENST00000491233 AQP10Q96PS8 301 aa9.21□□□□□ -0.94
COL6A3-211ENST00000491233 GGTLC3B5MD39 225 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 K7EQM0 130 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 GCGP01275 180 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 TIRAPP58753 221 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 DPPA3Q6W0C5 159 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 SUN5Q8TC36 379 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 SH3BGRL3Q9H299 93 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
COL6A3-211ENST00000491233 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 TAAR5O14804 337 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 RS1O15537 224 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 PFN1P07737 140 aaKnown RBP9.19□□□□□ -0.94
COL6A3-211ENST00000491233 XGP55808 180 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 FLI1Q01543 452 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-211ENST00000491233 RHOHQ15669 191 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 ZFP69Q49AA0 526 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 CFAP126Q5VTH2 177 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 PRNTQ86SH4 94 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
COL6A3-211ENST00000491233 CXorf1O96002 111 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 MBP02144 154 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 SUMO1P63165 101 aaKnown RBP9.18□□□□□ -0.94
COL6A3-211ENST00000491233 SERF2P84101 59 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 SMUG1Q53HV7 270 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 PRADC1Q9BSG0 188 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 ACTR3CQ9C0K3 210 aaPredicted RBP9.18□□□□□ -0.94
COL6A3-211ENST00000491233 MED28Q9H204 178 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 TMEM167BQ9NRX6 74 aa9.18□□□□□ -0.94
COL6A3-211ENST00000491233 TRAV8-6A0A0B4J262 113 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 TRBV6-4A0A1B0GX49 114 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 PGPEP1LA6NFU8 196 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 PSCAO43653 123 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 PTTG1O95997 202 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 Q5BKY6 102 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 LINC01556Q5JQF7 62 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 EPDR1Q9UM22 224 aa9.17□□□□□ -0.94
COL6A3-211ENST00000491233 CIDEAO60543 219 aa9.16□□□□□ -0.94
COL6A3-211ENST00000491233 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms