RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 TNFSF18Q9UNG2 199 aa12.56□□□□□ -0.4
SBDS-204ENST00000490953 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
SBDS-204ENST00000490953 SIVA1O15304 175 aa12.55□□□□□ -0.4
SBDS-204ENST00000490953 NXPH4O95158 308 aa12.55□□□□□ -0.4
SBDS-204ENST00000490953 TCRAP04437 139 aa12.55□□□□□ -0.4
SBDS-204ENST00000490953 TYMSP04818 313 aa12.55□□□□□ -0.4
SBDS-204ENST00000490953 MRPL23Q16540 153 aaKnown RBP12.55□□□□□ -0.4
SBDS-204ENST00000490953 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
SBDS-204ENST00000490953 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
SBDS-204ENST00000490953 M0R2P5 195 aa12.54□□□□□ -0.4
SBDS-204ENST00000490953 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
SBDS-204ENST00000490953 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
SBDS-204ENST00000490953 KRTAP17-1Q9BYP8 105 aa12.54□□□□□ -0.4
SBDS-204ENST00000490953 TRAV4A0A0B4J268 109 aa12.53□□□□□ -0.4
SBDS-204ENST00000490953 GGTLC3B5MD39 225 aa12.53□□□□□ -0.4
SBDS-204ENST00000490953 SUMO1P63165 101 aaKnown RBP12.53□□□□□ -0.4
SBDS-204ENST00000490953 RGS21Q2M5E4 152 aa12.53□□□□□ -0.4
SBDS-204ENST00000490953 NEGR1Q7Z3B1 354 aa12.53□□□□□ -0.4
SBDS-204ENST00000490953 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
SBDS-204ENST00000490953 PSG8Q9UQ74 426 aa12.53□□□□□ -0.4
SBDS-204ENST00000490953 K7EQD1 137 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 GYPEP15421 78 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
SBDS-204ENST00000490953 SRIP30626 198 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
SBDS-204ENST00000490953 GCGP01275 180 aa12.51□□□□□ -0.41
SBDS-204ENST00000490953 ORM1P02763 201 aa12.51□□□□□ -0.41
SBDS-204ENST00000490953 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
SBDS-204ENST00000490953 LINC00315P59091 139 aa12.51□□□□□ -0.41
SBDS-204ENST00000490953 FLI1Q01543 452 aaPredicted RBP12.51□□□□□ -0.41
SBDS-204ENST00000490953 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
SBDS-204ENST00000490953 TMEM75Q8N9X5 138 aa12.51□□□□□ -0.41
SBDS-204ENST00000490953 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
SBDS-204ENST00000490953 C9JCJ5 164 aa12.5□□□□□ -0.41
SBDS-204ENST00000490953 TAAR5O14804 337 aa12.5□□□□□ -0.41
SBDS-204ENST00000490953 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
SBDS-204ENST00000490953 ZNF726P1Q15940 193 aa12.5□□□□□ -0.41
SBDS-204ENST00000490953 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
SBDS-204ENST00000490953 A0A1W2PRE2 83 aa12.49□□□□□ -0.41
SBDS-204ENST00000490953 PFN1P07737 140 aaKnown RBP12.49□□□□□ -0.41
SBDS-204ENST00000490953 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
SBDS-204ENST00000490953 SPATA12Q7Z6I5 190 aa12.49□□□□□ -0.41
SBDS-204ENST00000490953 C11orf21Q9P2W6 132 aa12.49□□□□□ -0.41
SBDS-204ENST00000490953 DNAH11Q96DT5 4516 aa12.49□□□□□ -0.41
SBDS-204ENST00000490953 DYNC1H1Q14204 4646 aaKnown RBP12.49□□□□□ -0.41
SBDS-204ENST00000490953 FBLL1A6NHQ2 334 aaKnown RBP12.48□□□□□ -0.41
SBDS-204ENST00000490953 G3V3Q6 166 aa12.48□□□□□ -0.41
SBDS-204ENST00000490953 ARPC5O15511 151 aa12.48□□□□□ -0.41
SBDS-204ENST00000490953 UBE2G2P60604 165 aa12.48□□□□□ -0.41
SBDS-204ENST00000490953 TXNDC17Q9BRA2 123 aa12.48□□□□□ -0.41
SBDS-204ENST00000490953 IFNA7P01567 189 aa12.47□□□□□ -0.41
SBDS-204ENST00000490953 FGF8P55075 233 aaPredicted RBP12.47□□□□□ -0.41
SBDS-204ENST00000490953 SAPCD1Q5SSQ6 148 aa12.47□□□□□ -0.41
SBDS-204ENST00000490953 TRAV34A0A0B4J273 112 aa12.46□□□□□ -0.41
SBDS-204ENST00000490953 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.41
SBDS-204ENST00000490953 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
SBDS-204ENST00000490953 LY96Q9Y6Y9 160 aa12.46□□□□□ -0.41
SBDS-204ENST00000490953 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
SBDS-204ENST00000490953 PPT1P50897 306 aa12.45□□□□□ -0.42
SBDS-204ENST00000490953 Q6ZRN7 208 aaPredicted RBP12.45□□□□□ -0.42
SBDS-204ENST00000490953 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
SBDS-204ENST00000490953 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
SBDS-204ENST00000490953 LINC00479Q96M42 142 aa12.45□□□□□ -0.42
SBDS-204ENST00000490953 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
SBDS-204ENST00000490953 ARL2-SNX15V9GYD0 113 aa12.45□□□□□ -0.42
SBDS-204ENST00000490953 TRAV9-2A0A087WT02 112 aa12.44□□□□□ -0.42
SBDS-204ENST00000490953 MAP1LC3B2A6NCE7 125 aa12.44□□□□□ -0.42
SBDS-204ENST00000490953 PEX7O00628 323 aa12.44□□□□□ -0.42
SBDS-204ENST00000490953 MAP1LC3BQ9GZQ8 125 aa12.44□□□□□ -0.42
SBDS-204ENST00000490953 FAM74A7A6NL05 159 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 SMLR1H3BR10 107 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 RS1O15537 224 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 ZNF506Q5JVG8 444 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 CFAP126Q5VTH2 177 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 SH2D6Q7Z4S9 175 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 Q86TA4 180 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 NKX6-2Q9C056 277 aaPredicted RBP12.43□□□□□ -0.42
SBDS-204ENST00000490953 CYTL1Q9NRR1 136 aa12.43□□□□□ -0.42
SBDS-204ENST00000490953 IGHV3-73A0A0B4J1V6 119 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 PGPEP1LA6NFU8 196 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 CDK2AP2O75956 126 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
SBDS-204ENST00000490953 EVI2AP22794 236 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 NFE4Q86UQ8 179 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 HIST1H2BAQ96A08 127 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 TNFRSF18Q9Y5U5 241 aa12.42□□□□□ -0.42
SBDS-204ENST00000490953 CIDEAO60543 219 aa12.41□□□□□ -0.42
SBDS-204ENST00000490953 S100A4P26447 101 aaKnown RBP12.41□□□□□ -0.42
SBDS-204ENST00000490953 RHOHQ15669 191 aa12.41□□□□□ -0.42
SBDS-204ENST00000490953 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
SBDS-204ENST00000490953 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
SBDS-204ENST00000490953 IGKV3D-20A0A0C4DH25 116 aa12.4□□□□□ -0.42
SBDS-204ENST00000490953 FABP5P3A8MUU1 101 aa12.4□□□□□ -0.42
SBDS-204ENST00000490953 K7EP13 123 aa12.4□□□□□ -0.42
SBDS-204ENST00000490953 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms