RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 TMEM14CQ9P0S9 112 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 EPDR1Q9UM22 224 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 CUBNO60494 3623 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 APOHP02749 345 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-225ENST00000490851 NTF3P20783 257 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 MYCNOSP40205 109 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 GALR1P47211 349 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 KLK9Q2XQG4 91 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 KLK9Q9UKQ9 250 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 OR4C46A6NHA9 309 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 MALP21145 153 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 UBE2G1P62253 170 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 SEC11AP67812 179 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 SLC35B1P78383 322 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 IGFL4Q6B9Z1 124 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 OR4X2Q8NGF9 303 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 TMEM101Q96IK0 257 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 NAA38Q9BRA0 125 aaKnown RBP7.76□□□□□ -1.17
HDAC9-225ENST00000490851 PRSS22Q9GZN4 317 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 SELENOKQ9Y6D0 94 aa7.76□□□□□ -1.17
HDAC9-225ENST00000490851 TRAV8-1A0A0A6YYK1 113 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 C9JCJ5 164 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 DIRC3C9JPN6 131 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 IGLV1-40P01703 118 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 KRTAP1-1Q07627 177 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 PMCHL1Q16048 86 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 PRR31Q5SQ13 230 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 AP1S3Q96PC3 154 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 SMR3AQ99954 134 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 RNASE7Q9H1E1 156 aaKnown RBP7.75□□□□□ -1.17
HDAC9-225ENST00000490851 HIVEP2P31629 2446 aa7.75□□□□□ -1.17
HDAC9-225ENST00000490851 CLPSL1A2RUU4 121 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 M0R3E3 92 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 MRPS12O15235 138 aaKnown RBP7.74□□□□□ -1.17
HDAC9-225ENST00000490851 CFHR3Q02985 330 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 UNQ9165/PRO28630Q6UXU0 137 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 GOLT1AQ6ZVE7 132 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 IGF2BP2-AS1Q96M15 143 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 ZNF702PQ9H963 129 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 OTORQ9NRC9 128 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-225ENST00000490851 C9JAW5 83 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 H3BRM9 83 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 H3BUA1 57 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 HSBP1O75506 76 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 PFN1P07737 140 aaKnown RBP7.74□□□□□ -1.17
HDAC9-225ENST00000490851 CAMPP49913 170 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 MPV17L2Q567V2 206 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 BAGE2Q86Y30 109 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 TEX29Q8N6K0 151 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 USMG5Q96IX5 58 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 METTL26Q96S19 204 aa7.74□□□□□ -1.17
HDAC9-225ENST00000490851 IGLV2-8P01709 118 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 TCRAP04437 139 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 SRD5A1P18405 259 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 Q71RC1 249 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-225ENST00000490851 OR10G8Q8NGN5 311 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 SMAD5-AS1Q9Y6J3 95 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 EMP1P54849 157 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 HIST2H2BDQ6DRA6 164 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 Q6ZUT4 128 aa7.73□□□□□ -1.17
HDAC9-225ENST00000490851 WIPF2Q8TF74 440 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-225ENST00000490851 BUB3O43684 328 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 PSMB8P28062 276 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 AAMDCQ9H7C9 122 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 MUC21A0A0G2JKD1 596 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 MUC21A0A140T8X8 626 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 DNAJC9-AS1A6NH13 148 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 MUC21Q5SSG8 566 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 Q6AWC8 147 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 PRNTQ86SH4 94 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
HDAC9-225ENST00000490851 FAM181BA6NEQ2 426 aa7.71□□□□□ -1.17
HDAC9-225ENST00000490851 RHODO00212 210 aa7.71□□□□□ -1.17
HDAC9-225ENST00000490851 CA1P00915 261 aaPredicted RBP7.71□□□□□ -1.17
HDAC9-225ENST00000490851 CSN3P07498 182 aa7.71□□□□□ -1.17
HDAC9-225ENST00000490851 NDUFV3P56181 108 aaKnown RBP7.71□□□□□ -1.17
HDAC9-225ENST00000490851 RNF182Q8N6D2 247 aa7.71□□□□□ -1.17
HDAC9-225ENST00000490851 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.17
HDAC9-225ENST00000490851 F8W1H4 67 aa7.71□□□□□ -1.18
HDAC9-225ENST00000490851 IBA57Q5T440 356 aaKnown RBP7.71□□□□□ -1.18
HDAC9-225ENST00000490851 TMEM256Q8N2U0 113 aa7.71□□□□□ -1.18
HDAC9-225ENST00000490851 ESM1Q9NQ30 184 aa7.71□□□□□ -1.18
HDAC9-225ENST00000490851 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.18
HDAC9-225ENST00000490851 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.18
HDAC9-225ENST00000490851 IGKV3-7A0A075B6H7 116 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 TRAV9-2A0A087WT02 112 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 IGKV2-40A0A087WW87 121 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms