RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 M0R2P5 195 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 ARL14EPLP0DKL9 152 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 SRIP30626 198 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 SGK494Q96LW2 274 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 TREM1Q9NP99 234 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 C11orf21Q9P2W6 132 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 ORM1P02763 201 aa13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 STAG3L2P0CL84 134 aa13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 STAG3L3P0CL85 134 aa13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 ZNF80P51504 273 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 SCRT2Q9NQ03 307 aa13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 LY96Q9Y6Y9 160 aa13.14□□□□□ -0.31
TNFRSF1B-202ENST00000489921 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
TNFRSF1B-202ENST00000489921 OR4C5Q8NGB2 326 aa13.13□□□□□ -0.31
TNFRSF1B-202ENST00000489921 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
TNFRSF1B-202ENST00000489921 IGLV2-11P01706 119 aa13.12□□□□□ -0.31
TNFRSF1B-202ENST00000489921 GATA1P15976 413 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-202ENST00000489921 CDC34P49427 236 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-202ENST00000489921 Q5BKY6 102 aa13.12□□□□□ -0.31
TNFRSF1B-202ENST00000489921 HSD17B11Q8NBQ5 300 aa13.12□□□□□ -0.31
TNFRSF1B-202ENST00000489921 RAB24Q969Q5 203 aa13.12□□□□□ -0.31
TNFRSF1B-202ENST00000489921 TCRAP04437 139 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 DPPA3Q6W0C5 159 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 ASB13Q8WXK3 278 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 AQP10Q96PS8 301 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 SDF2L1Q9HCN8 221 aa13.11□□□□□ -0.31
TNFRSF1B-202ENST00000489921 TRAV9-2A0A087WT02 112 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 A0A087WTM6 91 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 C9JCJ5 164 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 GCHFRP30047 84 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 PCNPQ8WW12 178 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 MSRB1Q9NZV6 116 aa13.1□□□□□ -0.31
TNFRSF1B-202ENST00000489921 K7EP13 123 aa13.09□□□□□ -0.31
TNFRSF1B-202ENST00000489921 XGP55808 180 aa13.09□□□□□ -0.31
TNFRSF1B-202ENST00000489921 C5orf17Q8NAS9 161 aa13.09□□□□□ -0.31
TNFRSF1B-202ENST00000489921 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
TNFRSF1B-202ENST00000489921 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
TNFRSF1B-202ENST00000489921 SERTM2A0A1B0GWG4 89 aa13.08□□□□□ -0.32
TNFRSF1B-202ENST00000489921 GGTLC3B5MD39 225 aa13.08□□□□□ -0.32
TNFRSF1B-202ENST00000489921 TIRAPP58753 221 aa13.08□□□□□ -0.32
TNFRSF1B-202ENST00000489921 CFAP126Q5VTH2 177 aa13.08□□□□□ -0.32
TNFRSF1B-202ENST00000489921 TMEM75Q8N9X5 138 aa13.08□□□□□ -0.32
TNFRSF1B-202ENST00000489921 C9orf85Q96MD7 179 aa13.08□□□□□ -0.32
TNFRSF1B-202ENST00000489921 RS1O15537 224 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 EVI2AP22794 236 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 SUMO1P63165 101 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 SERF2P84101 59 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 ZNF876PQ49A33 203 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 SLC25A29Q8N8R3 303 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 HERC1Q15751 4861 aa13.07□□□□□ -0.32
TNFRSF1B-202ENST00000489921 VPS13BQ7Z7G8 4022 aa13.06□□□□□ -0.32
TNFRSF1B-202ENST00000489921 EREGO14944 169 aa13.06□□□□□ -0.32
TNFRSF1B-202ENST00000489921 GCGP01275 180 aa13.06□□□□□ -0.32
TNFRSF1B-202ENST00000489921 KRTAP10-1P60331 282 aa13.06□□□□□ -0.32
TNFRSF1B-202ENST00000489921 MED28Q9H204 178 aa13.06□□□□□ -0.32
TNFRSF1B-202ENST00000489921 PGPEP1LA6NFU8 196 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 FBLL1A6NHQ2 334 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 TAAR5O14804 337 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 PTTG1O95997 202 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 MBP02144 154 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 CRYGDP07320 174 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 PFN1P07737 140 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 FLI1Q01543 452 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 LINC00479Q96M42 142 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 TNFSF18Q9UNG2 199 aa13.05□□□□□ -0.32
TNFRSF1B-202ENST00000489921 RNF222A6NCQ9 220 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 CXorf1O96002 111 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 ZNF726P1Q15940 193 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 NHLRC2Q8NBF2 726 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 PTH2Q96A98 100 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 DNAH8Q96JB1 4490 aa13.04□□□□□ -0.32
TNFRSF1B-202ENST00000489921 SRRM2Q9UQ35 2752 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 IGHV3-73A0A0B4J1V6 119 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 TRBV6-4A0A1B0GX49 114 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 ZNF506Q5JVG8 444 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 RPL7L1Q6DKI1 246 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 PRNTQ86SH4 94 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 CYB561D1Q8N8Q1 229 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 TMEM167BQ9NRX6 74 aa13.03□□□□□ -0.32
TNFRSF1B-202ENST00000489921 LRCOL1A6NCL2 159 aa13.02□□□□□ -0.33
TNFRSF1B-202ENST00000489921 K7EQM0 130 aa13.02□□□□□ -0.33
TNFRSF1B-202ENST00000489921 CIDEAO60543 219 aa13.02□□□□□ -0.33
TNFRSF1B-202ENST00000489921 GIPP09681 153 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1B-202ENST00000489921 LINC01556Q5JQF7 62 aa13.02□□□□□ -0.33
TNFRSF1B-202ENST00000489921 C10orf126Q8N4M7 172 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms