RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 J3KRW8 73 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 ORM1P02763 201 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 FAM3BP58499 235 aaPredicted RBP10.4□□□□□ -0.74
VPS26A-205ENST00000489656 GTSF1Q8WW33 167 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 NEU1Q99519 415 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 C20orf144Q9BQM9 153 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 WFDC10AQ9H1F0 79 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
VPS26A-205ENST00000489656 TRAV12-3A0A0B4J271 114 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 A0A1W2PPQ1 181 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 HIGD1CA8MV81 97 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
VPS26A-205ENST00000489656 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 DNLZQ5SXM8 178 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 MORN3Q6PF18 240 aaPredicted RBP10.39□□□□□ -0.75
VPS26A-205ENST00000489656 Q6ZQT7 251 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 Q8N1Y9 231 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
VPS26A-205ENST00000489656 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 TGIF2-C20orf24A0A0A6YYL0 155 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 TYMSP04818 313 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 GZMBP10144 247 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 TCL1AP56279 114 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
VPS26A-205ENST00000489656 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 INSP01308 110 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 CTRLP40313 264 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 ANXA2RQ3ZCQ2 193 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 ATP5L2Q7Z4Y8 100 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 FAM210BQ96KR6 192 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
VPS26A-205ENST00000489656 MUC4Q99102 2169 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
VPS26A-205ENST00000489656 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 RAB5AP20339 215 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 FXYD7P58549 80 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
VPS26A-205ENST00000489656 KRTAP21-3Q3LHN1 58 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 FAM159AQ6UWV7 190 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 SRD5A3Q9H8P0 318 aa10.36□□□□□ -0.75
VPS26A-205ENST00000489656 IGHV1OR15-1A0A075B7D0 117 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-205ENST00000489656 OR5AL1P0C617 328 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 COX19Q49B96 90 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 MUC21Q5SSG8 566 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 TMEM256Q8N2U0 113 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 FER1L6-AS1Q8NA97 138 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-205ENST00000489656 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 NAGKQ9UJ70 344 aa10.35□□□□□ -0.75
VPS26A-205ENST00000489656 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 F2Z2F3 143 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 SNAI2O43623 268 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 KRTAP10-11P60412 298 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
VPS26A-205ENST00000489656 PGLYRP4Q96LB8 373 aa10.34□□□□□ -0.75
VPS26A-205ENST00000489656 A0A1B0GW15 77 aa10.33□□□□□ -0.76
VPS26A-205ENST00000489656 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
VPS26A-205ENST00000489656 ASIPP42127 132 aa10.33□□□□□ -0.76
VPS26A-205ENST00000489656 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
VPS26A-205ENST00000489656 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
VPS26A-205ENST00000489656 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
VPS26A-205ENST00000489656 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
VPS26A-205ENST00000489656 KIR2DL5BA0A0G2JN68 375 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 KIR2DL5BA0A0G2JPC4 375 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 RIGQ13278 110 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 KIR2DL5AQ8N109 375 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 CSNK1G2-AS1Q8NCQ2 148 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 KIR2DL5BQ8NHK3 375 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
VPS26A-205ENST00000489656 IGHV4-4A0A075B6R2 117 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 A8MZ25 164 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 G3V4G9 280 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 GNRH2O43555 120 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 SPINK4O60575 86 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
VPS26A-205ENST00000489656 RPS10P46783 165 aaKnown RBP10.31□□□□□ -0.76
VPS26A-205ENST00000489656 CACNG7P62955 275 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 HBBP68871 147 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
VPS26A-205ENST00000489656 GNB1LQ9BYB4 327 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 TP53TG3Q9ULZ0 132 aa10.31□□□□□ -0.76
VPS26A-205ENST00000489656 H3BVH4 76 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 MT-ND6P03923 174 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 S100A8P05109 93 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms