RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 CXorf1O96002 111 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 OR10J4P0C629 311 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 STAG3L2P0CL84 134 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 STAG3L3P0CL85 134 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 CRISP2P16562 243 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 EVI2AP22794 236 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 DPPA3Q6W0C5 159 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 TMED6Q8WW62 240 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 FXYD5Q96DB9 178 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 C8orf49Q96NF6 230 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 VGLL1Q99990 258 aa13.33□□□□□ -0.28
APTX-229ENST00000489583 MRPL16Q9NX20 251 aaKnown RBP13.33□□□□□ -0.28
APTX-229ENST00000489583 IGKV2-40A0A087WW87 121 aaPredicted RBP13.32□□□□□ -0.28
APTX-229ENST00000489583 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
APTX-229ENST00000489583 IGKV2D-40P01614 121 aaPredicted RBP13.32□□□□□ -0.28
APTX-229ENST00000489583 SRIP30626 198 aa13.32□□□□□ -0.28
APTX-229ENST00000489583 NDUFB4O95168 129 aa13.31□□□□□ -0.28
APTX-229ENST00000489583 ARL14EPLP0DKL9 152 aa13.31□□□□□ -0.28
APTX-229ENST00000489583 RAB5CP51148 216 aa13.31□□□□□ -0.28
APTX-229ENST00000489583 ZNF138P52744 262 aa13.31□□□□□ -0.28
APTX-229ENST00000489583 LYPD5Q6UWN5 251 aa13.31□□□□□ -0.28
APTX-229ENST00000489583 FAM19A4Q96LR4 140 aa13.31□□□□□ -0.28
APTX-229ENST00000489583 EIF3GO75821 320 aaKnown RBP eCLIP13.3□□□□□ -0.28
APTX-229ENST00000489583 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 CRYBA4P53673 196 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 Q6ZRN7 208 aaPredicted RBP13.3□□□□□ -0.28
APTX-229ENST00000489583 IQCF2Q8IXL9 164 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 LYPD1Q8N2G4 141 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 FAM213BQ8TBF2 198 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 TMEM167BQ9NRX6 74 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 ZNF492Q9P255 531 aa13.3□□□□□ -0.28
APTX-229ENST00000489583 DNAH5Q8TE73 4624 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 ORM1P02763 201 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 FAM74A1Q5RGS3 127 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 PHYHIPLQ96FC7 376 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 TXNDC17Q9BRA2 123 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 MSRB1Q9NZV6 116 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 TP53TG3Q9ULZ0 132 aa13.29□□□□□ -0.28
APTX-229ENST00000489583 TRBV7-9A0A0J9YWB2 115 aa13.28□□□□□ -0.28
APTX-229ENST00000489583 MAP1LC3B2A6NCE7 125 aa13.28□□□□□ -0.28
APTX-229ENST00000489583 GCHFRP30047 84 aa13.28□□□□□ -0.28
APTX-229ENST00000489583 RANP62826 216 aaKnown RBP13.28□□□□□ -0.28
APTX-229ENST00000489583 FAM159AQ6UWV7 190 aa13.28□□□□□ -0.28
APTX-229ENST00000489583 C10orf126Q8N4M7 172 aa13.28□□□□□ -0.28
APTX-229ENST00000489583 MAP1LC3BQ9GZQ8 125 aa13.28□□□□□ -0.28
APTX-229ENST00000489583 C9JCJ5 164 aa13.27□□□□□ -0.29
APTX-229ENST00000489583 PSCAO43653 123 aa13.27□□□□□ -0.29
APTX-229ENST00000489583 FHL2Q14192 279 aa13.27□□□□□ -0.29
APTX-229ENST00000489583 ZNF726P1Q15940 193 aa13.27□□□□□ -0.29
APTX-229ENST00000489583 ZFAND2AQ8N6M9 145 aa13.27□□□□□ -0.29
APTX-229ENST00000489583 SPXQ9BT56 116 aa13.27□□□□□ -0.29
APTX-229ENST00000489583 TRGV11A0A075B6L2 103 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 TEX46H3BTG2 121 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 H2AFB1P0C5Y9 115 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 FHITP49789 147 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 SULT1A2P50226 295 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 MUC21Q5SSG8 566 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 SFT2D1Q8WV19 159 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
APTX-229ENST00000489583 A0A087WTM6 91 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 GYPEP15421 78 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 SH2D6Q7Z4S9 175 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 CMTM2Q8TAZ6 248 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 TNFRSF18Q9Y5U5 241 aa13.25□□□□□ -0.29
APTX-229ENST00000489583 APOBP04114 4563 aaKnown RBP13.24□□□□□ -0.29
APTX-229ENST00000489583 RBAKDNA6NC62 111 aa13.24□□□□□ -0.29
APTX-229ENST00000489583 K7EQD1 137 aa13.24□□□□□ -0.29
APTX-229ENST00000489583 FGF8P55075 233 aaPredicted RBP13.24□□□□□ -0.29
APTX-229ENST00000489583 PRR9Q5T870 116 aa13.24□□□□□ -0.29
APTX-229ENST00000489583 Q5VSD8 79 aa13.24□□□□□ -0.29
APTX-229ENST00000489583 Q8TAT8 98 aa13.24□□□□□ -0.29
APTX-229ENST00000489583 SUN5Q8TC36 379 aa13.24□□□□□ -0.29
APTX-229ENST00000489583 FAM229AH3BQW9 127 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 CRYGDP07320 174 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 SFTA3P0C7M3 94 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 DNAH10OSP0CZ25 163 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 GCSHP23434 173 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 FUSP35637 526 aaKnown RBP eCLIP13.23□□□□□ -0.29
APTX-229ENST00000489583 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 TMEM183AQ8IXX5 376 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 OR4C5Q8NGB2 326 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 NAGKQ9UJ70 344 aa13.23□□□□□ -0.29
APTX-229ENST00000489583 PGPA6NDG6 321 aa13.22□□□□□ -0.29
APTX-229ENST00000489583 PPT1P50897 306 aa13.22□□□□□ -0.29
APTX-229ENST00000489583 ALKAL2Q6UX46 152 aa13.22□□□□□ -0.29
APTX-229ENST00000489583 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
APTX-229ENST00000489583 NKX6-2Q9C056 277 aaPredicted RBP13.22□□□□□ -0.29
APTX-229ENST00000489583 LENEPQ9Y5L5 61 aa13.22□□□□□ -0.29
APTX-229ENST00000489583 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
APTX-229ENST00000489583 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.29
APTX-229ENST00000489583 ARL6IP6Q8N6S5 226 aa13.21□□□□□ -0.29
APTX-229ENST00000489583 RASL10AQ92737 203 aa13.21□□□□□ -0.29
APTX-229ENST00000489583 ZNF479Q96JC4 524 aa13.21□□□□□ -0.29
APTX-229ENST00000489583 MDFICQ9P1T7 246 aa13.21□□□□□ -0.29
APTX-229ENST00000489583 XGP55808 180 aa13.2□□□□□ -0.3
APTX-229ENST00000489583 TRAV1-1A0A0B4J248 108 aa13.19□□□□□ -0.3
APTX-229ENST00000489583 TRAV4A0A0B4J268 109 aa13.19□□□□□ -0.3
APTX-229ENST00000489583 A0A1B0GV50 99 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms