RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TMEM88Q6PEY1 159 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 ZNF705AQ6ZN79 300 aaPredicted RBP5.68□□□□□ -1.5
SSR1-210ENST00000489567 PQLC2Q6ZP29 291 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 CBLN2Q8IUK8 224 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 MUC7Q8TAX7 377 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 MRPL53Q96EL3 112 aaKnown RBP5.68□□□□□ -1.5
SSR1-210ENST00000489567 ZNF471Q9BX82 626 aaPredicted RBP5.68□□□□□ -1.5
SSR1-210ENST00000489567 C1QTNF4Q9BXJ3 329 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 PRO1933Q9H354 126 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 Q9H3A6 140 aa5.68□□□□□ -1.5
SSR1-210ENST00000489567 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 TRBV7-9A0A0J9YWB2 115 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 KANTRA0A1W2PQU2 76 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 NPIPB6E9PJ23 425 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 GCHFRP30047 84 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 OR10J6PQ8NGY7 276 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 VGLL1Q99990 258 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 ACTR3CQ9C0K3 210 aaPredicted RBP5.67□□□□□ -1.5
SSR1-210ENST00000489567 AGPAT4-IT1Q9H0P7 198 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
SSR1-210ENST00000489567 GEMIN7Q9H840 131 aaKnown RBP5.67□□□□□ -1.5
SSR1-210ENST00000489567 TGIF2-C20orf24A0A0A6YYL0 155 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 OCIAD2Q56VL3 154 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 ZFAND6Q6FIF0 208 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 IL17DQ8TAD2 202 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 IGF2BP2-AS1Q96M15 143 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 CTXND1A0A1B0GTU2 59 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 PGPA6NDG6 321 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 CXorf1O96002 111 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 SEC11BP0C7V7 166 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 MIFP14174 115 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 JOSD1Q15040 202 aaPredicted RBP5.66□□□□□ -1.5
SSR1-210ENST00000489567 TMEM241Q24JQ0 296 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 LYPD1Q8N2G4 141 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 TMED6Q8WW62 240 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 FAM19A4Q96LR4 140 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 SEC11CQ9BY50 192 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 C11orf68Q9H3H3 251 aaKnown RBP5.66□□□□□ -1.5
SSR1-210ENST00000489567 OTORQ9NRC9 128 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 DNAH7Q8WXX0 4024 aa5.66□□□□□ -1.5
SSR1-210ENST00000489567 DIRC3C9JPN6 131 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 PAGE4O60829 102 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 GCGP01275 180 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 GNG5P63218 68 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 OR5I1Q13606 314 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 CASC10Q5T4H9 136 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 GFI1BQ5VTD9 330 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 C9orf47Q6ZRZ4 202 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 BOD1L2Q8IYS8 172 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 OR10D4PQ8NGN7 298 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 Q8TAT8 98 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 HIST1H2BAQ96A08 127 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 SSBP4Q9BWG4 385 aaPredicted RBP5.65□□□□□ -1.5
SSR1-210ENST00000489567 CELA1Q9UNI1 258 aa5.65□□□□□ -1.5
SSR1-210ENST00000489567 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.51
SSR1-210ENST00000489567 TRAV26-1A0A087WT03 109 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 LOC102723971A0A1B0GUV8 181 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 PRSS29PA6NIE9 313 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 ZNF705GA8MUZ8 300 aaPredicted RBP5.64□□□□□ -1.51
SSR1-210ENST00000489567 GGTLC3B5MD39 225 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 M0R036 132 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 INSP01308 110 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 AMBPP02760 352 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 TPT1P13693 172 aaKnown RBP5.64□□□□□ -1.51
SSR1-210ENST00000489567 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
SSR1-210ENST00000489567 PRR9Q5T870 116 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 Q6ZQT7 251 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 ODF3Q96PU9 254 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 YTHDF2Q9Y5A9 579 aaKnown RBP5.64□□□□□ -1.51
SSR1-210ENST00000489567 TRAV8-1A0A0A6YYK1 113 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 MAP1LC3B2A6NCE7 125 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 KLLNB2CW77 178 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 C3orf84H3BNL1 204 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 TSPAN13O95857 204 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 AZU1P20160 251 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 CSN1S1P47710 185 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 EMP1P54849 157 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 ZFAND2AQ8N6M9 145 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 FAM213BQ8TBF2 198 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 PCNPQ8WW12 178 aaKnown RBP5.64□□□□□ -1.51
SSR1-210ENST00000489567 LINC00477Q96M19 166 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 TMEM167BQ9NRX6 74 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 ZNF492Q9P255 531 aa5.64□□□□□ -1.51
SSR1-210ENST00000489567 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 A0A1B0GV50 99 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 RBAKDNA6NC62 111 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 SMIM9A6NGZ8 99 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 UMAD1C9J7I0 102 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 PHOX2AO14813 284 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 PPP1R2P9O14990 202 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 SLC25A5P05141 298 aaKnown RBP5.63□□□□□ -1.51
SSR1-210ENST00000489567 RAB5AP20339 215 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 ZNF138P52744 262 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 TMEM78Q5T7P6 136 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 GOLT1AQ6ZVE7 132 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 ZNF664Q8N3J9 261 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 OR4C5Q8NGB2 326 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 C11orf45Q8TAV5 145 aa5.63□□□□□ -1.51
SSR1-210ENST00000489567 SGK494Q96LW2 274 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms