RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 AGPAT4-IT1Q9H0P7 198 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 ZNF492Q9P255 531 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 C5orf52A6NGY3 159 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 A8MWL6 223 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 H3BMM0 161 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 K7EN84 100 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 LTAP01374 205 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 IGLV2-8P01709 118 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 TRGC2P03986 189 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 CT45A10P0DMU9 189 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 HLA-DRB4P13762 266 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 Q86TA4 180 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 ZFP82Q8N141 532 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 Q8TAT8 98 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 SGK494Q96LW2 274 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 LYSTQ99698 3801 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 PPP1R14DQ9NXH3 145 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 V9GYV3 84 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 HLA-DRB4X5D2U9 266 aa7.67□□□□□ -1.18
SCAMP4-208ENST00000489554 DNAH1Q9P2D7 4330 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 SMIM27A0A1W2PRY6 76 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 GIG44P09565 113 aaPredicted RBP7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 NUTF2P61970 127 aaKnown RBP7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 SNRPEP62304 92 aaKnown RBP7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 HIST1H1AQ02539 215 aaPredicted RBP7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 CLUHP3Q96NS8 147 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 NDFIP1Q9BT67 221 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 MLST8Q9BVC4 326 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 GNB1LQ9BYB4 327 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 KLK5Q9Y337 293 aaPredicted RBP7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 TRAPPC1Q9Y5R8 145 aa7.66□□□□□ -1.18
SCAMP4-208ENST00000489554 XKRY2A2RUG3 117 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 P01737 135 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 OR5I1Q13606 314 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 KIR3DS1Q14943 382 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 PRR9Q5T870 116 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 COX8CQ7Z4L0 72 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 ATP5L2Q7Z4Y8 100 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 C11orf45Q8TAV5 145 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 C1QTNF4Q9BXJ3 329 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 PSG8Q9UQ74 426 aa7.65□□□□□ -1.18
SCAMP4-208ENST00000489554 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 TRGC1P0CF51 173 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 MIFP14174 115 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HOXA5P20719 270 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 S100A2P29034 98 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 ZNF138P52744 262 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 NDUFA6P56556 154 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 FABP9Q0Z7S8 132 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 Q6AWC8 147 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 ZFAND2AQ8N6M9 145 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 Q8NAQ8 132 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 TSKUQ8WUA8 353 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 PHLDA1Q8WV24 401 aaPredicted RBP7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 LINC00477Q96M19 166 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 C8orf49Q96NF6 230 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 ODF3Q96PU9 254 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 RNASE7Q9H1E1 156 aaKnown RBP7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 RPP21Q9H633 154 aaKnown RBP7.64□□□□□ -1.19
SCAMP4-208ENST00000489554 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 A0A1B0GW15 77 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 DUSP14O95147 198 aaKnown RBP7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 IGKV3-20P01619 116 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 HLA-DQA1P01909 254 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 CRISP2P16562 243 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 AKR1D1P51857 326 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 RPS20P60866 119 aaKnown RBP7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 EBLN2Q6P2I7 272 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 PRNTQ86SH4 94 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 CSNK1G2-AS1Q8NCQ2 148 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 LINC00476Q8WZB0 136 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 LENEPQ9Y5L5 61 aa7.63□□□□□ -1.19
SCAMP4-208ENST00000489554 IGHV4-28A0A0C4DH34 117 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 TRBV7-9A0A0J9YWB2 115 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 C19orf71A6NCJ1 209 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 KLLNB2CW77 178 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 DEFB4AO15263 64 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 RBMY1A1P0DJD3 496 aaKnown RBP7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 RBMY1CP0DJD4 496 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 CRIP1P50238 77 aa7.62□□□□□ -1.19
SCAMP4-208ENST00000489554 ZNF80P51504 273 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms