RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.75
CLDN11-209ENST00000489485 KLLNB2CW77 178 aa10.4□□□□□ -0.75
CLDN11-209ENST00000489485 Q6ZQT7 251 aa10.4□□□□□ -0.75
CLDN11-209ENST00000489485 SMIM12Q96EX1 92 aa10.4□□□□□ -0.75
CLDN11-209ENST00000489485 FAM210BQ96KR6 192 aa10.4□□□□□ -0.75
CLDN11-209ENST00000489485 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.75
CLDN11-209ENST00000489485 CRXO43186 299 aaPredicted RBP10.39□□□□□ -0.75
CLDN11-209ENST00000489485 AMBPP02760 352 aa10.39□□□□□ -0.75
CLDN11-209ENST00000489485 CXCL1P09341 107 aa10.39□□□□□ -0.75
CLDN11-209ENST00000489485 CRIP1P50238 77 aa10.39□□□□□ -0.75
CLDN11-209ENST00000489485 Q6ZWC4 215 aa10.39□□□□□ -0.75
CLDN11-209ENST00000489485 B9D2Q9BPU9 175 aa10.39□□□□□ -0.75
CLDN11-209ENST00000489485 TRBV24-1A0A075B6N3 115 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 NDUFA6P56556 154 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 GFI1BQ5VTD9 330 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 TGIF2-C20orf24A0A0A6YYL0 155 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 INSP01308 110 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
CLDN11-209ENST00000489485 PPP1R2P9O14990 202 aa10.37□□□□□ -0.75
CLDN11-209ENST00000489485 PFN1P07737 140 aaKnown RBP10.37□□□□□ -0.75
CLDN11-209ENST00000489485 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
CLDN11-209ENST00000489485 RNASE7Q9H1E1 156 aaKnown RBP10.37□□□□□ -0.75
CLDN11-209ENST00000489485 C7orf71A4D174 169 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 FABP5P3A8MUU1 101 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 ERVFC1-1P60608 527 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 DNLZQ5SXM8 178 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 RETNQ9HD89 108 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 PRKDCP78527 4128 aaKnown RBP10.36□□□□□ -0.75
CLDN11-209ENST00000489485 SPRY2O43597 315 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BKO60814 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 SH2D1AO60880 128 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BJP06899 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BOP23527 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BBP33778 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BDP58876 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BCP62807 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST2H2BEQ16778 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.36□□□□□ -0.75
CLDN11-209ENST00000489485 IBA57Q5T440 356 aaKnown RBP10.36□□□□□ -0.75
CLDN11-209ENST00000489485 Q6AWC8 147 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BHQ93079 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 RNF183Q96D59 192 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 ANAPC16Q96DE5 110 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BNQ99877 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 HIST1H2BMQ99879 126 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 SPATA25Q9BR10 227 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 GOLT1BQ9Y3E0 138 aa10.36□□□□□ -0.75
CLDN11-209ENST00000489485 TENM3Q9P273 2699 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 TRAV21A0A0B4J279 112 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 ZNF324O75467 553 aaPredicted RBP10.35□□□□□ -0.75
CLDN11-209ENST00000489485 TRGC2P03986 189 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
CLDN11-209ENST00000489485 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 HTN1P15515 57 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
CLDN11-209ENST00000489485 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 SFRP2Q96HF1 295 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 BTF3L4Q96K17 158 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 TM2D3Q9BRN9 247 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 ZMAT4Q9H898 229 aa10.35□□□□□ -0.75
CLDN11-209ENST00000489485 MUC21Q5SSG8 566 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 OR11H2Q8NH07 326 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 NUDT11Q96G61 164 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 LINC01587Q99440 93 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 NAGKQ9UJ70 344 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 P01737 135 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 ORM1P02763 201 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 C11orf21Q9P2W6 132 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 TP53TG1Q9Y2A0 90 aa10.34□□□□□ -0.75
CLDN11-209ENST00000489485 H7BYZ3 331 aa10.33□□□□□ -0.76
CLDN11-209ENST00000489485 TRGC1P0CF51 173 aa10.33□□□□□ -0.76
CLDN11-209ENST00000489485 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
CLDN11-209ENST00000489485 ZNF705AQ6ZN79 300 aaPredicted RBP10.33□□□□□ -0.76
CLDN11-209ENST00000489485 TMEM256Q8N2U0 113 aa10.33□□□□□ -0.76
CLDN11-209ENST00000489485 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 SSTP61278 116 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 HIST3H2BBQ8N257 126 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 PYGO2Q9BRQ0 406 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 ZNF705GA8MUZ8 300 aaPredicted RBP10.32□□□□□ -0.76
CLDN11-209ENST00000489485 LINC00587B1AMM8 73 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 PRM2P04554 102 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 KCNIP4Q6PIL6 250 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 FAM231DQ6ZW35 169 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 OR10G8Q8NGN5 311 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 OSTCQ9NRP0 149 aa10.32□□□□□ -0.76
CLDN11-209ENST00000489485 IGKV3D-20A0A0C4DH25 116 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms