RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 DEFA1P59665 94 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 DEFA3P59666 94 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 HAMPP81172 84 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 ASAH1Q13510 395 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 KHDC3LQ587J8 217 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 Q6ZSN1 163 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 NHLRC2Q8NBF2 726 aa6.32□□□□□ -1.4
SNX17-207ENST00000489402 NTN5Q8WTR8 489 aaPredicted RBP6.32□□□□□ -1.4
SNX17-207ENST00000489402 WDR61Q9GZS3 305 aaKnown RBP6.32□□□□□ -1.4
SNX17-207ENST00000489402 IGHV3-38A0A0C4DH36 116 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 M0R2P5 195 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 EIF3GO75821 320 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNX17-207ENST00000489402 TAS2R45P59539 299 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 LRRC37A5PQ49AS3 106 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 FAM74A1Q5RGS3 127 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 MZT2BQ6NZ67 158 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 CMTM2Q8TAZ6 248 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 TMED6Q8WW62 240 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 ATP5SQ99766 215 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 TMEM70Q9BUB7 260 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 RPH3ALQ9UNE2 315 aa6.31□□□□□ -1.4
SNX17-207ENST00000489402 TRAV8-6A0A0B4J262 113 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 TRAV21A0A0B4J279 112 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 TIRAPP58753 221 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 CYCSP99999 105 aaKnown RBP6.3□□□□□ -1.4
SNX17-207ENST00000489402 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 FFAR4Q5NUL3 377 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 HYLS1Q96M11 299 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 NMES1Q9C002 83 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 SDF2L1Q9HCN8 221 aa6.3□□□□□ -1.4
SNX17-207ENST00000489402 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 IGHV3-16A0A0C4DH30 117 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 LOC100131303A0A0U1RQF7 123 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 FBLL1A6NHQ2 334 aaKnown RBP6.29□□□□□ -1.4
SNX17-207ENST00000489402 SIX6O95475 246 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 PFN1P07737 140 aaKnown RBP6.29□□□□□ -1.4
SNX17-207ENST00000489402 LINC01556Q5JQF7 62 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 OR10J3Q5JRS4 329 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 KCNS1Q96KK3 526 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 Q9HAA7 133 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 OTORQ9NRC9 128 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 OR5AC2Q9NZP5 309 aa6.29□□□□□ -1.4
SNX17-207ENST00000489402 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 PGPA6NDG6 321 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 GNRH2O43555 120 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 TYMSP04818 313 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 GATA1P15976 413 aaPredicted RBP6.28□□□□□ -1.4
SNX17-207ENST00000489402 GOLT1AQ6ZVE7 132 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 Q8N814 137 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 ENKURQ8TC29 256 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 SCGB1C1Q8TD33 95 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 NDFIP1Q9BT67 221 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 TREM1Q9NP99 234 aa6.28□□□□□ -1.4
SNX17-207ENST00000489402 F6UZH7 168 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 CIDEAO60543 219 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 PFDN1O60925 122 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 IGHV3-30P01768 117 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 IGHV3-33P01772 117 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 PET100P0DJ07 73 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 IGHV3-30-3P0DP02 117 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 IGHV3-30-5P0DP03 117 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 RHOHQ15669 191 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 ASB13Q8WXK3 278 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 MBD2Q9UBB5 411 aa6.27□□□□□ -1.41
SNX17-207ENST00000489402 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
SNX17-207ENST00000489402 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
SNX17-207ENST00000489402 A0A1W2PPV4 95 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 H0YIZ8 118 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 C1QBP02746 253 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 LAGE3Q14657 143 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 ACOT6Q3I5F7 207 aaPredicted RBP6.26□□□□□ -1.41
SNX17-207ENST00000489402 ZNF876PQ49A33 203 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 LELP1Q5T871 98 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 PQLC2Q6ZP29 291 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 ARL6IP6Q8N6S5 226 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 SLC25A29Q8N8R3 303 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 PPP1R1CQ8WVI7 109 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 SH3BGRL3Q9H299 93 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 HSPB11Q9Y547 144 aa6.26□□□□□ -1.41
SNX17-207ENST00000489402 TRAV8-1A0A0A6YYK1 113 aa6.25□□□□□ -1.41
SNX17-207ENST00000489402 TRBV6-4A0A1B0GX49 114 aa6.25□□□□□ -1.41
SNX17-207ENST00000489402 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
SNX17-207ENST00000489402 CFAP126Q5VTH2 177 aa6.25□□□□□ -1.41
SNX17-207ENST00000489402 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
SNX17-207ENST00000489402 MARVELD1Q9BSK0 173 aa6.25□□□□□ -1.41
SNX17-207ENST00000489402 SMIM3Q9BZL3 60 aa6.25□□□□□ -1.41
SNX17-207ENST00000489402 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
SNX17-207ENST00000489402 IGHV3-73A0A0B4J1V6 119 aa6.24□□□□□ -1.41
SNX17-207ENST00000489402 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
SNX17-207ENST00000489402 K7EQM0 130 aa6.24□□□□□ -1.41
SNX17-207ENST00000489402 TAAR5O14804 337 aa6.24□□□□□ -1.41
SNX17-207ENST00000489402 RS1O15537 224 aa6.24□□□□□ -1.41
SNX17-207ENST00000489402 MPC2O95563 127 aa6.24□□□□□ -1.41
SNX17-207ENST00000489402 MGST1P10620 155 aaKnown RBP6.24□□□□□ -1.41
SNX17-207ENST00000489402 RPL12P30050 165 aaKnown RBP6.24□□□□□ -1.41
SNX17-207ENST00000489402 GNG5P63218 68 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms