RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 NTF3P20783 257 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 CACNG7P62955 275 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 LY6EQ16553 131 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 C21orf62-AS1Q17RA5 79 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 DEFB112Q30KQ8 113 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 Q6YL49 198 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 SPATA12Q7Z6I5 190 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 APRG1Q8IVJ8 170 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 RNF152Q8N8N0 203 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 Q8N976 141 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 OR10J6PQ8NGY7 276 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 MIEN1Q9BRT3 115 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 AGPAT4-IT1Q9H0P7 198 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 C2orf70A6NJV1 201 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 LEPROTL1O95214 131 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 ORM1P02763 201 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 ID1P41134 155 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 HILS1P60008 231 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 BLCAPP62952 87 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 PSMG4Q5JS54 123 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 PET117Q6UWS5 81 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 SMIM15Q7Z3B0 74 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 TMEM86BQ8N661 226 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 DEFB125Q8N687 156 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 Q8TAT8 98 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 MYOZ3Q8TDC0 251 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF418Q8TF45 676 aaPredicted RBP6.42□□□□□ -1.38
VTI1A-207ENST00000489357 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 PRO1933Q9H354 126 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 SMPXQ9UHP9 88 aa6.42□□□□□ -1.38
VTI1A-207ENST00000489357 DNHD1Q96M86 4753 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 TRAV21A0A0B4J279 112 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV1-24A0A0C4DH33 117 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 LINC01546A6NGU7 62 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 SNAI2O43623 268 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV4-59P01825 116 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF80P51504 273 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF124Q15973 351 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 KRTAP24-1Q3LI83 254 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 UNQ9165/PRO28630Q6UXU0 137 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 Q8N2B8 174 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF738Q8NE65 137 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 OR10AG1Q8NH19 301 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 PRSS3P2Q8NHM4 247 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 TMEM158Q8WZ71 300 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 URB1-AS1Q96HZ7 61 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 FAM19A4Q96LR4 140 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 UBE2E2Q96LR5 201 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 MAP1LC3CQ9BXW4 147 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV3OR16-8A0A075B7F1 116 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 PRSS47A8MTI9 375 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 PRAC2D3DTV9 90 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 TCF21O43680 179 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 HLA-DMBP28068 263 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 TWIST1Q15672 202 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 RNF182Q8N6D2 247 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 SPATA3Q8NHX4 192 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 PRELID3AQ96N28 172 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 TPPP3Q9BW30 176 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 RHPN1-AS1Q9BWJ2 59 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 KLK15Q9H2R5 256 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 NXT2Q9NPJ8 142 aaKnown RBP6.4□□□□□ -1.38
VTI1A-207ENST00000489357 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 LINC00527Q9UJ94 153 aa6.4□□□□□ -1.38
VTI1A-207ENST00000489357 IGKV3D-20A0A0C4DH25 116 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 IGHV3-66A0A0C4DH42 116 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 K7EMI3 77 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 M0R143 59 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 TRBV12-3P01733 135 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 LGALS1P09382 135 aaKnown RBP6.39□□□□□ -1.39
VTI1A-207ENST00000489357 CKS2P33552 79 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 ERCC8Q13216 396 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 MRPL51Q4U2R6 128 aaKnown RBP6.39□□□□□ -1.39
VTI1A-207ENST00000489357 EBLN2Q6P2I7 272 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 ZNF575Q86XF7 245 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 DPF1Q92782 380 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 MAP1LC3AQ9H492 121 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
VTI1A-207ENST00000489357 FBN3Q75N90 2809 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 TMSB15BA0A087X1C1 80 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 TRAV2A0A0B4J234 112 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 TMEM213A2RRL7 107 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 D6R8Y8 96 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 ZNF207O43670 478 aaKnown RBP6.38□□□□□ -1.39
VTI1A-207ENST00000489357 PPP1R17O96001 155 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 SPATA45Q537H7 98 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 IGFL4Q6B9Z1 124 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 AMN1Q8IY45 258 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 ZFAND2AQ8N6M9 145 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 OR8A1Q8NGG7 326 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 MRAP2Q96G30 205 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 MS4A6AQ9H2W1 248 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 PAM16Q9Y3D7 125 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms