RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MUC4Q99102 2169 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 EIF3GO75821 320 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 GCHFRP30047 84 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 ZNF726P1Q15940 193 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 FAM159AQ6UWV7 190 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 TP53TG3Q9ULZ0 132 aa9.6□□□□□ -0.87
SPTLC1-207ENST00000488921 SERTM2A0A1B0GWG4 89 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 PPT1P50897 306 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 FGF8P55075 233 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 SLAQ13239 276 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 MUC21Q5SSG8 566 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 MRPL16Q9NX20 251 aaKnown RBP9.59□□□□□ -0.87
SPTLC1-207ENST00000488921 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 A0A1B0GV50 99 aa9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 Q6ZQT7 251 aa9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 SPXQ9BT56 116 aa9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 NDFIP1Q9BT67 221 aa9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 Q9H8V8 135 aa9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
SPTLC1-207ENST00000488921 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 K7EQM0 130 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 TMEM183BQ1AE95 376 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 TDRG1Q3Y452 100 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 TMEM183AQ8IXX5 376 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 C5orf17Q8NAS9 161 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 NAGKQ9UJ70 344 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 ICOSQ9Y6W8 199 aa9.57□□□□□ -0.88
SPTLC1-207ENST00000488921 A0A096LPF7 62 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 PAX4O43316 350 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 IFNA1P01562 189 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 ESRGQ1W209 222 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 KCNS1Q96KK3 526 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 NKX6-2Q9C056 277 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 TREM1Q9NP99 234 aa9.56□□□□□ -0.88
SPTLC1-207ENST00000488921 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 GNG5P63218 68 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 CST9LP1Q5W188 147 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 SUN5Q8TC36 379 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 MDFICQ9P1T7 246 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 HHLA3Q9XRX5 114 aa9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
SPTLC1-207ENST00000488921 TRGV4A0A0C4DH28 118 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 A0A1W2PRE2 83 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 F6UZH7 168 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 TCRAP04437 139 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 MED14OSP0DP75 135 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 BTF3P20290 206 aaKnown RBP9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 CRYBA4P53673 196 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 UBE2G2P60604 165 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 RASL10AQ92737 203 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 MANBALQ9NQG1 85 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 GNG13Q9P2W3 67 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 HERC2O95714 4834 aa9.54□□□□□ -0.88
SPTLC1-207ENST00000488921 SUMO1P63165 101 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-207ENST00000488921 IFITM2Q01629 132 aa9.53□□□□□ -0.88
SPTLC1-207ENST00000488921 FHL2Q14192 279 aa9.53□□□□□ -0.88
SPTLC1-207ENST00000488921 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-207ENST00000488921 PCNPQ8WW12 178 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-207ENST00000488921 ARL2-SNX15V9GYD0 113 aa9.53□□□□□ -0.88
SPTLC1-207ENST00000488921 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 M0R2P5 195 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 PAGE4O60829 102 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 TYMSP04818 313 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 CCL20P78556 96 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 TNP2Q05952 138 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 CYB561D1Q8N8Q1 229 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 TMEM75Q8N9X5 138 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 TVP23CQ96ET8 276 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 C8orf49Q96NF6 230 aa9.52□□□□□ -0.89
SPTLC1-207ENST00000488921 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 GGTLC3B5MD39 225 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 SIVA1O15304 175 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 ORM1P02763 201 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 SRIP30626 198 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 FLI1Q01543 452 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 ZNF479Q96JC4 524 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 PSG8Q9UQ74 426 aa9.51□□□□□ -0.89
SPTLC1-207ENST00000488921 C9JCJ5 164 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 LCE2BO14633 110 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 GNRH2O43555 120 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 GCGP01275 180 aa9.5□□□□□ -0.89
SPTLC1-207ENST00000488921 SFTA3P0C7M3 94 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms