RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
GGPS1-206ENST00000488594 ATP5SQ99766 215 aa12.7□□□□□ -0.38
GGPS1-206ENST00000488594 TRAV21A0A0B4J279 112 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 GNRH2O43555 120 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 CIDEAO60543 219 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 H2AFB2P0C5Z0 115 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 PRADC1Q9BSG0 188 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
GGPS1-206ENST00000488594 TAS2R45P59539 299 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 KHDC3LQ587J8 217 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 DEFB104AQ8WTQ1 72 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 KCNS1Q96KK3 526 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 SDF2L1Q9HCN8 221 aa12.69□□□□□ -0.38
GGPS1-206ENST00000488594 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 RHOHQ15669 191 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 FAM74A1Q5RGS3 127 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 LELP1Q5T871 98 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 Q6ZSA8 131 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 OTORQ9NRC9 128 aa12.68□□□□□ -0.38
GGPS1-206ENST00000488594 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
GGPS1-206ENST00000488594 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
GGPS1-206ENST00000488594 TYMSP04818 313 aa12.67□□□□□ -0.38
GGPS1-206ENST00000488594 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
GGPS1-206ENST00000488594 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
GGPS1-206ENST00000488594 HYLS1Q96M11 299 aa12.67□□□□□ -0.38
GGPS1-206ENST00000488594 LINC00528Q8N1L1 170 aa12.66□□□□□ -0.38
GGPS1-206ENST00000488594 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
GGPS1-206ENST00000488594 ZNF876PQ49A33 203 aa12.65□□□□□ -0.38
GGPS1-206ENST00000488594 ASB13Q8WXK3 278 aa12.65□□□□□ -0.38
GGPS1-206ENST00000488594 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
GGPS1-206ENST00000488594 SH3BGRL3Q9H299 93 aa12.65□□□□□ -0.38
GGPS1-206ENST00000488594 TREM1Q9NP99 234 aa12.65□□□□□ -0.38
GGPS1-206ENST00000488594 FAM240BA0A1B0GVZ2 78 aa12.64□□□□□ -0.39
GGPS1-206ENST00000488594 PGPA6NDG6 321 aa12.64□□□□□ -0.39
GGPS1-206ENST00000488594 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
GGPS1-206ENST00000488594 NMES1Q9C002 83 aa12.64□□□□□ -0.39
GGPS1-206ENST00000488594 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
GGPS1-206ENST00000488594 RPH3ALQ9UNE2 315 aa12.64□□□□□ -0.39
GGPS1-206ENST00000488594 TRAV8-3A0A0A6YYJ7 113 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 F6UZH7 168 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 RS1O15537 224 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 LRRC37A5PQ49AS3 106 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 GOLT1AQ6ZVE7 132 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 MBD2Q9UBB5 411 aa12.63□□□□□ -0.39
GGPS1-206ENST00000488594 MGST1P10620 155 aaKnown RBP12.62□□□□□ -0.39
GGPS1-206ENST00000488594 CYCSP99999 105 aaKnown RBP12.61□□□□□ -0.39
GGPS1-206ENST00000488594 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
GGPS1-206ENST00000488594 TVP23CQ96ET8 276 aa12.61□□□□□ -0.39
GGPS1-206ENST00000488594 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
GGPS1-206ENST00000488594 H0YIZ8 118 aa12.6□□□□□ -0.39
GGPS1-206ENST00000488594 WFDC2Q14508 124 aa12.6□□□□□ -0.39
GGPS1-206ENST00000488594 MZT2BQ6NZ67 158 aa12.6□□□□□ -0.39
GGPS1-206ENST00000488594 PQLC2Q6ZP29 291 aa12.6□□□□□ -0.39
GGPS1-206ENST00000488594 SYT8Q8NBV8 401 aa12.6□□□□□ -0.39
GGPS1-206ENST00000488594 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
GGPS1-206ENST00000488594 TRAV8-1A0A0A6YYK1 113 aa12.59□□□□□ -0.39
GGPS1-206ENST00000488594 SIX6O95475 246 aa12.59□□□□□ -0.39
GGPS1-206ENST00000488594 PTH2Q96A98 100 aa12.59□□□□□ -0.39
GGPS1-206ENST00000488594 COX11Q9Y6N1 276 aa12.59□□□□□ -0.39
GGPS1-206ENST00000488594 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
GGPS1-206ENST00000488594 SERTM2A0A1B0GWG4 89 aa12.58□□□□□ -0.4
GGPS1-206ENST00000488594 ASAH1Q13510 395 aa12.58□□□□□ -0.4
GGPS1-206ENST00000488594 DPPA3Q6W0C5 159 aa12.58□□□□□ -0.4
GGPS1-206ENST00000488594 TAAR5O14804 337 aa12.57□□□□□ -0.4
GGPS1-206ENST00000488594 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
GGPS1-206ENST00000488594 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-206ENST00000488594 A0A1W2PPV4 95 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 LECT2O14960 151 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 SCXQ7RTU7 201 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 HSPB11Q9Y547 144 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 GGTLC3B5MD39 225 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 GNG5P63218 68 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 ACOT6Q3I5F7 207 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-206ENST00000488594 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
GGPS1-206ENST00000488594 A0A087WWC5 75 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 EIF3GO75821 320 aaKnown RBP eCLIP12.55□□□□□ -0.4
GGPS1-206ENST00000488594 PET100P0DJ07 73 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 ZFP2Q6ZN57 461 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 Q8N3U1 123 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 Q8N976 141 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 RMI2Q96E14 147 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 C11orf21Q9P2W6 132 aa12.55□□□□□ -0.4
GGPS1-206ENST00000488594 PGPEP1LA6NFU8 196 aa12.54□□□□□ -0.4
GGPS1-206ENST00000488594 K7EQM0 130 aa12.54□□□□□ -0.4
GGPS1-206ENST00000488594 OXTP01178 125 aa12.54□□□□□ -0.4
GGPS1-206ENST00000488594 SEC11BP0C7V7 166 aa12.54□□□□□ -0.4
GGPS1-206ENST00000488594 DAZ4Q86SG3 579 aaKnown RBP12.54□□□□□ -0.4
GGPS1-206ENST00000488594 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
GGPS1-206ENST00000488594 DAZ3Q9NR90 486 aaKnown RBP12.54□□□□□ -0.4
GGPS1-206ENST00000488594 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
GGPS1-206ENST00000488594 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 A8MWV9 139 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms