RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ZNF479Q96JC4 524 aa15.85■□□□□ 0.13
CUL4A-209ENST00000488558 ACTR3CQ9C0K3 210 aaPredicted RBP15.85■□□□□ 0.13
CUL4A-209ENST00000488558 SH3BGRL3Q9H299 93 aa15.85■□□□□ 0.13
CUL4A-209ENST00000488558 SDF2L1Q9HCN8 221 aa15.85■□□□□ 0.13
CUL4A-209ENST00000488558 TRAV4A0A0B4J268 109 aa15.84■□□□□ 0.13
CUL4A-209ENST00000488558 M0R2P5 195 aa15.84■□□□□ 0.13
CUL4A-209ENST00000488558 NXPH4O95158 308 aa15.84■□□□□ 0.13
CUL4A-209ENST00000488558 TYMSP04818 313 aa15.84■□□□□ 0.13
CUL4A-209ENST00000488558 NEGR1Q7Z3B1 354 aa15.84■□□□□ 0.13
CUL4A-209ENST00000488558 RYR1P21817 5038 aa15.84■□□□□ 0.13
CUL4A-209ENST00000488558 BORCS7-ASMTA0A0B4J1R7 106 aa15.83■□□□□ 0.12
CUL4A-209ENST00000488558 FBLL1A6NHQ2 334 aaKnown RBP15.83■□□□□ 0.12
CUL4A-209ENST00000488558 C16orf90A8MZG2 172 aa15.83■□□□□ 0.12
CUL4A-209ENST00000488558 ORM1P02763 201 aa15.83■□□□□ 0.12
CUL4A-209ENST00000488558 SFTA3P0C7M3 94 aa15.83■□□□□ 0.12
CUL4A-209ENST00000488558 GGTLC3B5MD39 225 aa15.82■□□□□ 0.12
CUL4A-209ENST00000488558 GNRH2O43555 120 aa15.82■□□□□ 0.12
CUL4A-209ENST00000488558 RPL7L1Q6DKI1 246 aaKnown RBP15.82■□□□□ 0.12
CUL4A-209ENST00000488558 LYPD5Q6UWN5 251 aa15.82■□□□□ 0.12
CUL4A-209ENST00000488558 FXYD6-FXYD2A0A087WZ82 144 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 K7EQD1 137 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 SRIP30626 198 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 CYB561D1Q8N8Q1 229 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 OR2T35Q8NGX2 323 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 PCNPQ8WW12 178 aaKnown RBP15.81■□□□□ 0.12
CUL4A-209ENST00000488558 EPDR1Q9UM22 224 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 PSG8Q9UQ74 426 aa15.81■□□□□ 0.12
CUL4A-209ENST00000488558 A0A1W2PRE2 83 aa15.8■□□□□ 0.12
CUL4A-209ENST00000488558 IGLV2-11P01706 119 aa15.8■□□□□ 0.12
CUL4A-209ENST00000488558 LINC00315P59091 139 aa15.8■□□□□ 0.12
CUL4A-209ENST00000488558 SUMO1P63165 101 aaKnown RBP15.8■□□□□ 0.12
CUL4A-209ENST00000488558 TMEM75Q8N9X5 138 aa15.8■□□□□ 0.12
CUL4A-209ENST00000488558 OR4C5Q8NGB2 326 aa15.8■□□□□ 0.12
CUL4A-209ENST00000488558 SGK494Q96LW2 274 aa15.8■□□□□ 0.12
CUL4A-209ENST00000488558 C9JCJ5 164 aa15.79■□□□□ 0.12
CUL4A-209ENST00000488558 TAAR5O14804 337 aa15.79■□□□□ 0.12
CUL4A-209ENST00000488558 FLI1Q01543 452 aaPredicted RBP15.79■□□□□ 0.12
CUL4A-209ENST00000488558 ZFP69Q49AA0 526 aa15.79■□□□□ 0.12
CUL4A-209ENST00000488558 TXNDC17Q9BRA2 123 aa15.79■□□□□ 0.12
CUL4A-209ENST00000488558 CTXND1A0A1B0GTU2 59 aa15.78■□□□□ 0.12
CUL4A-209ENST00000488558 CDK2AP2O75956 126 aa15.78■□□□□ 0.12
CUL4A-209ENST00000488558 GCGP01275 180 aa15.78■□□□□ 0.12
CUL4A-209ENST00000488558 PFN1P07737 140 aaKnown RBP15.78■□□□□ 0.12
CUL4A-209ENST00000488558 GYPEP15421 78 aa15.78■□□□□ 0.12
CUL4A-209ENST00000488558 ZNF80P51504 273 aaPredicted RBP15.78■□□□□ 0.12
CUL4A-209ENST00000488558 RGS21Q2M5E4 152 aa15.78■□□□□ 0.12
CUL4A-209ENST00000488558 Q6ZRN7 208 aaPredicted RBP15.78■□□□□ 0.12
CUL4A-209ENST00000488558 LRP1BQ9NZR2 4599 aa15.78■□□□□ 0.12
CUL4A-209ENST00000488558 K7EP13 123 aa15.77■□□□□ 0.12
CUL4A-209ENST00000488558 SMUG1Q53HV7 270 aa15.77■□□□□ 0.12
CUL4A-209ENST00000488558 SAPCD1Q5SSQ6 148 aa15.77■□□□□ 0.12
CUL4A-209ENST00000488558 SPATA12Q7Z6I5 190 aa15.77■□□□□ 0.12
CUL4A-209ENST00000488558 G3V3Q6 166 aa15.76■□□□□ 0.11
CUL4A-209ENST00000488558 CIDEAO60543 219 aa15.76■□□□□ 0.11
CUL4A-209ENST00000488558 ZNF726P1Q15940 193 aa15.76■□□□□ 0.11
CUL4A-209ENST00000488558 SH2D6Q7Z4S9 175 aa15.76■□□□□ 0.11
CUL4A-209ENST00000488558 C11orf21Q9P2W6 132 aa15.76■□□□□ 0.11
CUL4A-209ENST00000488558 GATA1P15976 413 aaPredicted RBP15.75■□□□□ 0.11
CUL4A-209ENST00000488558 PRNTQ86SH4 94 aa15.75■□□□□ 0.11
CUL4A-209ENST00000488558 PTH2Q96A98 100 aa15.75■□□□□ 0.11
CUL4A-209ENST00000488558 C9orf85Q96MD7 179 aa15.75■□□□□ 0.11
CUL4A-209ENST00000488558 TRAV9-2A0A087WT02 112 aa15.74■□□□□ 0.11
CUL4A-209ENST00000488558 NKX6-2Q9C056 277 aaPredicted RBP15.74■□□□□ 0.11
CUL4A-209ENST00000488558 LY96Q9Y6Y9 160 aa15.74■□□□□ 0.11
CUL4A-209ENST00000488558 HSPG2P98160 4391 aa15.74■□□□□ 0.11
CUL4A-209ENST00000488558 TIRAPP58753 221 aa15.73■□□□□ 0.11
CUL4A-209ENST00000488558 ZNF876PQ49A33 203 aa15.73■□□□□ 0.11
CUL4A-209ENST00000488558 AKR1C8PQ5T2L2 129 aa15.73■□□□□ 0.11
CUL4A-209ENST00000488558 NFE4Q86UQ8 179 aa15.73■□□□□ 0.11
CUL4A-209ENST00000488558 PPT1P50897 306 aa15.72■□□□□ 0.11
CUL4A-209ENST00000488558 RS1O15537 224 aa15.71■□□□□ 0.11
CUL4A-209ENST00000488558 DNAH10OSP0CZ25 163 aa15.71■□□□□ 0.11
CUL4A-209ENST00000488558 WFDC10BQ8IUB3 73 aa15.71■□□□□ 0.11
CUL4A-209ENST00000488558 ARPC5O15511 151 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 IFNA7P01567 189 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 KRTAP10-2P60368 255 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 CFAP126Q5VTH2 177 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 HIST1H2BAQ96A08 127 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 CYTL1Q9NRR1 136 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 ARL2-SNX15V9GYD0 113 aa15.7■□□□□ 0.1
CUL4A-209ENST00000488558 LOC100131303A0A0U1RQF7 123 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 TRBV6-4A0A1B0GX49 114 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 FAM74A7A6NL05 159 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 PEX7O00628 323 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 RNASE3P12724 160 aaKnown RBP15.69■□□□□ 0.1
CUL4A-209ENST00000488558 EVI2AP22794 236 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 Q86TA4 180 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 LINC00479Q96M42 142 aa15.69■□□□□ 0.1
CUL4A-209ENST00000488558 UBE2G2P60604 165 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 ERVFC1-1P60608 527 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 RHOHQ15669 191 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 ZNF506Q5JVG8 444 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 PIK3CD-AS1Q5SR53 167 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 DPPA3Q6W0C5 159 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 SLC25A29Q8N8R3 303 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 NHLRC2Q8NBF2 726 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 BOLA1Q9Y3E2 137 aa15.68■□□□□ 0.1
CUL4A-209ENST00000488558 DNAH5Q8TE73 4624 aa15.67■□□□□ 0.1
CUL4A-209ENST00000488558 TRAV34A0A0B4J273 112 aa15.67■□□□□ 0.1
CUL4A-209ENST00000488558 MAP1LC3B2A6NCE7 125 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms