RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
NELFE-209ENST00000488426 ACTL10Q5JWF8 245 aa9.52□□□□□ -0.89
NELFE-209ENST00000488426 RASL11AQ6T310 242 aa9.52□□□□□ -0.89
NELFE-209ENST00000488426 NDUFA11Q86Y39 141 aa9.52□□□□□ -0.89
NELFE-209ENST00000488426 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
NELFE-209ENST00000488426 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 GZMBP10144 247 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 TFPI2P48307 235 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 ZNF80P51504 273 aaPredicted RBP9.51□□□□□ -0.89
NELFE-209ENST00000488426 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
NELFE-209ENST00000488426 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 RBPMS2Q6ZRY4 209 aaKnown RBP9.51□□□□□ -0.89
NELFE-209ENST00000488426 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
NELFE-209ENST00000488426 TMEM189A5PLL7 270 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 G3V4G9 280 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 MT-ND6P03923 174 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
NELFE-209ENST00000488426 HIST1H1AQ02539 215 aaPredicted RBP9.51□□□□□ -0.89
NELFE-209ENST00000488426 DEFB114Q30KQ6 69 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 GFI1BQ5VTD9 330 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 Q6AWC8 147 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 FAM19A4Q96LR4 140 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
NELFE-209ENST00000488426 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
NELFE-209ENST00000488426 ZNF705DP0CH99 300 aaPredicted RBP9.5□□□□□ -0.89
NELFE-209ENST00000488426 ZNF705BP0CI00 300 aaPredicted RBP9.5□□□□□ -0.89
NELFE-209ENST00000488426 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
NELFE-209ENST00000488426 FRZBQ92765 325 aa9.5□□□□□ -0.89
NELFE-209ENST00000488426 TRAPPC1Q9Y5R8 145 aa9.5□□□□□ -0.89
NELFE-209ENST00000488426 FABP4P15090 132 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 MRPL54Q6P161 138 aaKnown RBP9.49□□□□□ -0.89
NELFE-209ENST00000488426 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 F6UB75 175 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 SPINK4O60575 86 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
NELFE-209ENST00000488426 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 CRISP2P16562 243 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 ZFAND2AQ8N6M9 145 aa9.49□□□□□ -0.89
NELFE-209ENST00000488426 SPAG8Q99932 426 aaPredicted RBP9.49□□□□□ -0.89
NELFE-209ENST00000488426 A0A0J9YX75 114 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 SNURFLB1AK76 121 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 HLA-DQA1P01909 254 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 CDKN1BP46527 198 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 DEFB1P60022 68 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 EBLN2Q6P2I7 272 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 TMEM136Q6ZRR5 245 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 PGLYRP4Q96LB8 373 aa9.48□□□□□ -0.89
NELFE-209ENST00000488426 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
NELFE-209ENST00000488426 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
NELFE-209ENST00000488426 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
NELFE-209ENST00000488426 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
NELFE-209ENST00000488426 OR4C46A6NHA9 309 aa9.47□□□□□ -0.89
NELFE-209ENST00000488426 ORM1P02763 201 aa9.47□□□□□ -0.89
NELFE-209ENST00000488426 HBBP68871 147 aa9.47□□□□□ -0.89
NELFE-209ENST00000488426 CD300EQ496F6 205 aaPredicted RBP9.47□□□□□ -0.89
NELFE-209ENST00000488426 TRAV21A0A0B4J279 112 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 A0A1B0GUT8 65 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 A0A1B0GW15 77 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 FRMD6-AS1P0C7T7 363 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 LEPP41159 167 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 COA6Q5JTJ3 125 aaKnown RBP9.46□□□□□ -0.9
NELFE-209ENST00000488426 PRR9Q5T870 116 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 BORCS7Q96B45 105 aa9.46□□□□□ -0.9
NELFE-209ENST00000488426 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 KLLNB2CW77 178 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 GPX1P07203 203 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 CTRLP40313 264 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 RIGQ13278 110 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 IGLC6P0CF74 106 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
NELFE-209ENST00000488426 IGKV3D-20A0A0C4DH25 116 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 AMBPP02760 352 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 CD33P20138 364 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 DEFB131AP59861 70 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 PDZD11Q5EBL8 140 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
NELFE-209ENST00000488426 ZNF256Q9Y2P7 627 aaPredicted RBP9.44□□□□□ -0.9
NELFE-209ENST00000488426 A8MTW9 85 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 APCSP02743 223 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 PF4P02776 101 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 ARMS2P0C7Q2 107 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 TSPOP30536 169 aa9.43□□□□□ -0.9
NELFE-209ENST00000488426 CAMPP49913 170 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms