RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 K7EQD1 137 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 ATP6V0CP27449 155 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 Q5BKY6 102 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 NEGR1Q7Z3B1 354 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 RAB24Q969Q5 203 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 PSMG3Q9BT73 122 aaPredicted RBP13.2□□□□□ -0.3
CD55-209ENST00000488171 MED28Q9H204 178 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 TYMSP04818 313 aa13.19□□□□□ -0.3
CD55-209ENST00000488171 SGK494Q96LW2 274 aa13.19□□□□□ -0.3
CD55-209ENST00000488171 TRAV4A0A0B4J268 109 aa13.18□□□□□ -0.3
CD55-209ENST00000488171 M0R2P5 195 aa13.18□□□□□ -0.3
CD55-209ENST00000488171 GYPEP15421 78 aa13.18□□□□□ -0.3
CD55-209ENST00000488171 GCHFRP30047 84 aa13.18□□□□□ -0.3
CD55-209ENST00000488171 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
CD55-209ENST00000488171 TCRAP04437 139 aa13.17□□□□□ -0.3
CD55-209ENST00000488171 SRIP30626 198 aa13.17□□□□□ -0.3
CD55-209ENST00000488171 SERF2P84101 59 aa13.17□□□□□ -0.3
CD55-209ENST00000488171 C5orf17Q8NAS9 161 aa13.17□□□□□ -0.3
CD55-209ENST00000488171 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
CD55-209ENST00000488171 ORM1P02763 201 aa13.16□□□□□ -0.3
CD55-209ENST00000488171 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
CD55-209ENST00000488171 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
CD55-209ENST00000488171 KCNS1Q96KK3 526 aa13.16□□□□□ -0.3
CD55-209ENST00000488171 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
CD55-209ENST00000488171 TNFRSF18Q9Y5U5 241 aa13.16□□□□□ -0.3
CD55-209ENST00000488171 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
CD55-209ENST00000488171 MBP02144 154 aa13.15□□□□□ -0.3
CD55-209ENST00000488171 GIPP09681 153 aaPredicted RBP13.15□□□□□ -0.3
CD55-209ENST00000488171 PCNPQ8WW12 178 aaKnown RBP13.15□□□□□ -0.3
CD55-209ENST00000488171 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
CD55-209ENST00000488171 C11orf21Q9P2W6 132 aa13.15□□□□□ -0.3
CD55-209ENST00000488171 APOBP04114 4563 aaKnown RBP13.15□□□□□ -0.31
CD55-209ENST00000488171 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
CD55-209ENST00000488171 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
CD55-209ENST00000488171 NDFIP1Q9BT67 221 aa13.14□□□□□ -0.31
CD55-209ENST00000488171 TNFSF18Q9UNG2 199 aa13.14□□□□□ -0.31
CD55-209ENST00000488171 LOC100131303A0A0U1RQF7 123 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 RNF222A6NCQ9 220 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 C9JCJ5 164 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 CXorf1O96002 111 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 SUMO1P63165 101 aaKnown RBP13.13□□□□□ -0.31
CD55-209ENST00000488171 MAPKAPK5-AS1Q8N8E1 139 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 EPDR1Q9UM22 224 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
CD55-209ENST00000488171 DNAH5Q8TE73 4624 aa13.12□□□□□ -0.31
CD55-209ENST00000488171 GATA1P15976 413 aaPredicted RBP13.12□□□□□ -0.31
CD55-209ENST00000488171 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
CD55-209ENST00000488171 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
CD55-209ENST00000488171 ACTR3CQ9C0K3 210 aaPredicted RBP13.12□□□□□ -0.31
CD55-209ENST00000488171 K7EQM0 130 aa13.11□□□□□ -0.31
CD55-209ENST00000488171 GCGP01275 180 aa13.11□□□□□ -0.31
CD55-209ENST00000488171 FLI1Q01543 452 aaPredicted RBP13.11□□□□□ -0.31
CD55-209ENST00000488171 TMEM75Q8N9X5 138 aa13.11□□□□□ -0.31
CD55-209ENST00000488171 INO80EQ8NBZ0 244 aaPredicted RBP13.11□□□□□ -0.31
CD55-209ENST00000488171 TAAR5O14804 337 aa13.1□□□□□ -0.31
CD55-209ENST00000488171 PFN1P07737 140 aaKnown RBP13.1□□□□□ -0.31
CD55-209ENST00000488171 DNAH10OSP0CZ25 163 aa13.1□□□□□ -0.31
CD55-209ENST00000488171 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
CD55-209ENST00000488171 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
CD55-209ENST00000488171 CYB561D1Q8N8Q1 229 aa13.1□□□□□ -0.31
CD55-209ENST00000488171 TRAV9-2A0A087WT02 112 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 FXYD6-FXYD2A0A087WZ82 144 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 SMUG1Q53HV7 270 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 DPPA3Q6W0C5 159 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 NFE4Q86UQ8 179 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
CD55-209ENST00000488171 A0A1W2PRE2 83 aa13.08□□□□□ -0.31
CD55-209ENST00000488171 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.31
CD55-209ENST00000488171 K7EP13 123 aa13.08□□□□□ -0.31
CD55-209ENST00000488171 RS1O15537 224 aa13.08□□□□□ -0.31
CD55-209ENST00000488171 ERVFC1-1P60608 527 aa13.08□□□□□ -0.31
CD55-209ENST00000488171 CFAP126Q5VTH2 177 aa13.08□□□□□ -0.31
CD55-209ENST00000488171 BORCS7-ASMTA0A0B4J1R7 106 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 G3V3Q6 166 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 EVI2AP22794 236 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 FUSP35637 526 aaKnown RBP eCLIP13.07□□□□□ -0.32
CD55-209ENST00000488171 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 SLC25A29Q8N8R3 303 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 MSRB1Q9NZV6 116 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
CD55-209ENST00000488171 TIRAPP58753 221 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 ZFP69Q49AA0 526 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 Q8N1X5 172 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 NHLRC2Q8NBF2 726 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
CD55-209ENST00000488171 TRAV34A0A0B4J273 112 aa13.06□□□□□ -0.32
CD55-209ENST00000488171 CTXND1A0A1B0GTU2 59 aa13.06□□□□□ -0.32
CD55-209ENST00000488171 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
CD55-209ENST00000488171 ZNF506Q5JVG8 444 aa13.06□□□□□ -0.32
CD55-209ENST00000488171 SAPCD1Q5SSQ6 148 aa13.06□□□□□ -0.32
CD55-209ENST00000488171 PTH2Q96A98 100 aa13.06□□□□□ -0.32
CD55-209ENST00000488171 A0A087WTM6 91 aa13.05□□□□□ -0.32
CD55-209ENST00000488171 IGHV3-73A0A0B4J1V6 119 aa13.05□□□□□ -0.32
CD55-209ENST00000488171 TRBV6-4A0A1B0GX49 114 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms