RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 GCGP01275 180 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 IGLV2-11P01706 119 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 ZNF80P51504 273 aaPredicted RBP16.45■□□□□ 0.22
RNF38-208ENST00000488058 ESRGQ1W209 222 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 C1orf134Q5TEV5 83 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 OR11H4Q8NGC9 324 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 KCNS1Q96KK3 526 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 TRAV34A0A0B4J273 112 aa16.44■□□□□ 0.22
RNF38-208ENST00000488058 TRGV4A0A0C4DH28 118 aa16.44■□□□□ 0.22
RNF38-208ENST00000488058 SFTA3P0C7M3 94 aa16.44■□□□□ 0.22
RNF38-208ENST00000488058 SMUG1Q53HV7 270 aa16.44■□□□□ 0.22
RNF38-208ENST00000488058 PRO0255Q9UI72 69 aa16.44■□□□□ 0.22
RNF38-208ENST00000488058 KANTRA0A1W2PQU2 76 aa16.43■□□□□ 0.22
RNF38-208ENST00000488058 FHL2Q14192 279 aa16.43■□□□□ 0.22
RNF38-208ENST00000488058 LINC00479Q96M42 142 aa16.43■□□□□ 0.22
RNF38-208ENST00000488058 ZNF471Q9BX82 626 aaPredicted RBP16.43■□□□□ 0.22
RNF38-208ENST00000488058 HHLA3Q9XRX5 114 aa16.43■□□□□ 0.22
RNF38-208ENST00000488058 ICOSQ9Y6W8 199 aa16.43■□□□□ 0.22
RNF38-208ENST00000488058 A0A0D9SG52 128 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 FBLL1A6NHQ2 334 aaKnown RBP16.42■□□□□ 0.22
RNF38-208ENST00000488058 FAM74A7A6NL05 159 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 HMSDA8MTL9 139 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 M0R2P5 195 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 STOML3Q8TAV4 291 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 RASL10AQ92737 203 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 ZNF479Q96JC4 524 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 Q9H8V8 135 aa16.42■□□□□ 0.22
RNF38-208ENST00000488058 PEX7O00628 323 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 BCL2L11O43521 198 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 FHITP49789 147 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 PPT1P50897 306 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 CRYBA4P53673 196 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 SLAQ13239 276 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 SAPCD1Q5SSQ6 148 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 C11orf21Q9P2W6 132 aa16.41■□□□□ 0.22
RNF38-208ENST00000488058 PFN1P07737 140 aaKnown RBP16.4■□□□□ 0.22
RNF38-208ENST00000488058 NKX6-2Q9C056 277 aaPredicted RBP16.4■□□□□ 0.22
RNF38-208ENST00000488058 MRPS16Q9Y3D3 137 aaKnown RBP16.4■□□□□ 0.22
RNF38-208ENST00000488058 ARL2-SNX15V9GYD0 113 aa16.4■□□□□ 0.22
RNF38-208ENST00000488058 OR4C5Q8NGB2 326 aa16.39■□□□□ 0.21
RNF38-208ENST00000488058 FAM213BQ8TBF2 198 aa16.39■□□□□ 0.21
RNF38-208ENST00000488058 TRAV4A0A0B4J268 109 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 A0A1B0GVY2 172 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 C9JCJ5 164 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 PFDN1O60925 122 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 SEC11BP0C7V7 166 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 CST9LP1Q5W188 147 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 UPK3BQ9BT76 320 aa16.38■□□□□ 0.21
RNF38-208ENST00000488058 A0A1B0GV50 99 aa16.37■□□□□ 0.21
RNF38-208ENST00000488058 Q86TA4 180 aa16.37■□□□□ 0.21
RNF38-208ENST00000488058 C6orf223Q8N319 242 aa16.37■□□□□ 0.21
RNF38-208ENST00000488058 HIST1H2BAQ96A08 127 aa16.37■□□□□ 0.21
RNF38-208ENST00000488058 MRPL23Q16540 153 aaKnown RBP16.36■□□□□ 0.21
RNF38-208ENST00000488058 SFT2D1Q8WV19 159 aa16.36■□□□□ 0.21
RNF38-208ENST00000488058 PCNPQ8WW12 178 aaKnown RBP16.36■□□□□ 0.21
RNF38-208ENST00000488058 DNAH2Q9P225 4427 aa16.35■□□□□ 0.21
RNF38-208ENST00000488058 UMAD1C9J7I0 102 aa16.35■□□□□ 0.21
RNF38-208ENST00000488058 UBE2G1P62253 170 aa16.35■□□□□ 0.21
RNF38-208ENST00000488058 EIF5AP63241 154 aaKnown RBP16.35■□□□□ 0.21
RNF38-208ENST00000488058 TTC32Q5I0X7 151 aa16.35■□□□□ 0.21
RNF38-208ENST00000488058 TMUB2Q71RG4 321 aa16.35■□□□□ 0.21
RNF38-208ENST00000488058 ZNF876PQ49A33 203 aa16.34■□□□□ 0.21
RNF38-208ENST00000488058 PAGE4O60829 102 aa16.33■□□□□ 0.2
RNF38-208ENST00000488058 GYPEP15421 78 aa16.33■□□□□ 0.2
RNF38-208ENST00000488058 SRIP30626 198 aa16.33■□□□□ 0.2
RNF38-208ENST00000488058 FABP5P3A8MUU1 101 aa16.32■□□□□ 0.2
RNF38-208ENST00000488058 TPT1P13693 172 aaKnown RBP16.32■□□□□ 0.2
RNF38-208ENST00000488058 NEGR1Q7Z3B1 354 aa16.32■□□□□ 0.2
RNF38-208ENST00000488058 C9orf85Q96MD7 179 aa16.32■□□□□ 0.2
RNF38-208ENST00000488058 KRTAP1-5Q9BYS1 174 aa16.32■□□□□ 0.2
RNF38-208ENST00000488058 K7EQD1 137 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 NXPH4O95158 308 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 ORM1P02763 201 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 S100A4P26447 101 aaKnown RBP16.31■□□□□ 0.2
RNF38-208ENST00000488058 AKR1C3P42330 323 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 MBD3L1Q8WWY6 194 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 FMC1Q96HJ9 113 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 DNAH17Q9UFH2 4485 aa16.31■□□□□ 0.2
RNF38-208ENST00000488058 HECTD4Q9Y4D8 3996 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 FAT2Q9NYQ8 4349 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 IGKV3D-20A0A0C4DH25 116 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 TNP2Q05952 138 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 LYPD5Q6UWN5 251 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 DPPA3Q6W0C5 159 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 ZC2HC1AQ96GY0 325 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 ZFP30Q9Y2G7 519 aa16.3■□□□□ 0.2
RNF38-208ENST00000488058 LOC100131303A0A0U1RQF7 123 aa16.29■□□□□ 0.2
RNF38-208ENST00000488058 PGPEP1LA6NFU8 196 aa16.29■□□□□ 0.2
RNF38-208ENST00000488058 SIVA1O15304 175 aa16.29■□□□□ 0.2
RNF38-208ENST00000488058 H2AFB1P0C5Y9 115 aa16.29■□□□□ 0.2
RNF38-208ENST00000488058 RNASE3P12724 160 aaKnown RBP16.29■□□□□ 0.2
RNF38-208ENST00000488058 ZNF506Q5JVG8 444 aa16.29■□□□□ 0.2
RNF38-208ENST00000488058 TCEAL7Q9BRU2 100 aa16.29■□□□□ 0.2
RNF38-208ENST00000488058 IGHV3-73A0A0B4J1V6 119 aa16.28■□□□□ 0.2
RNF38-208ENST00000488058 B4DEV8 164 aa16.28■□□□□ 0.2
RNF38-208ENST00000488058 M0R036 132 aa16.28■□□□□ 0.2
RNF38-208ENST00000488058 RS1O15537 224 aa16.28■□□□□ 0.2
RNF38-208ENST00000488058 ASIPP42127 132 aa16.28■□□□□ 0.2
RNF38-208ENST00000488058 A0A1W2PPQ1 181 aa16.27■□□□□ 0.2
RNF38-208ENST00000488058 SH2D1AO60880 128 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms