RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 IGKV2D-40P01614 121 aaPredicted RBP8.55□□□□□ -1.04
SDC3-204ENST00000487984 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
SDC3-204ENST00000487984 BTN1A1Q13410 526 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 ICAM4Q14773 271 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 Q6ZTI0 123 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 ZNF575Q86XF7 245 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 RXFP4Q8TDU9 374 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 ZNF503Q96F45 646 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 GSN-AS1Q9NRJ2 163 aa8.55□□□□□ -1.04
SDC3-204ENST00000487984 F6UZH7 168 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 CRISP2P16562 243 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 RNASE4P34096 147 aaKnown RBP8.54□□□□□ -1.04
SDC3-204ENST00000487984 UBE2G2P60604 165 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 PRR9Q5T870 116 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 C9orf47Q6ZRZ4 202 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 SLC7A5P1Q8MH63 180 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 VGLL1Q99990 258 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 LINC00467Q9BRT7 94 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 RYR1P21817 5038 aa8.54□□□□□ -1.04
SDC3-204ENST00000487984 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 TMEM250H0YL14 139 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 GPX1P07203 203 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 RANP62826 216 aaKnown RBP8.53□□□□□ -1.04
SDC3-204ENST00000487984 TNP2Q05952 138 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 ANXA2RQ3ZCQ2 193 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 TMEM78Q5T7P6 136 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 ZFAND2AQ8N6M9 145 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 CMTM2Q8TAZ6 248 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 OTORQ9NRC9 128 aa8.53□□□□□ -1.04
SDC3-204ENST00000487984 TRGV2A0A075B6R0 118 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 TRGV1A0A0A0MS02 117 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 KRBOX1C9JBD0 128 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 H3BNG1 76 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 CSN1S1P47710 185 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 SUMO1P63165 101 aaKnown RBP8.52□□□□□ -1.05
SDC3-204ENST00000487984 Q6ZQT7 251 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 ARL6IP6Q8N6S5 226 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 Q9H8V8 135 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 ZNF492Q9P255 531 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 KLF12Q9Y4X4 402 aa8.52□□□□□ -1.05
SDC3-204ENST00000487984 PGPA6NDG6 321 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 K7EQM0 130 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 SPINK4O60575 86 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 TCL1AP56279 114 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 ESRGQ1W209 222 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 C5orf17Q8NAS9 161 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 Q8TAT8 98 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 HIST1H2BAQ96A08 127 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 VSIG2Q96IQ7 327 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 C18orf15Q96N68 181 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 KRTAP1-5Q9BYS1 174 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 Q9H3A6 140 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 TP53TG3Q9ULZ0 132 aa8.51□□□□□ -1.05
SDC3-204ENST00000487984 IGHV1OR15-1A0A075B7D0 117 aa8.5□□□□□ -1.05
SDC3-204ENST00000487984 SERTM2A0A1B0GWG4 89 aa8.5□□□□□ -1.05
SDC3-204ENST00000487984 TMEM218A2RU14 115 aa8.5□□□□□ -1.05
SDC3-204ENST00000487984 S100A9P06702 114 aaKnown RBP8.5□□□□□ -1.05
SDC3-204ENST00000487984 SRP19P09132 144 aaKnown RBP8.5□□□□□ -1.05
SDC3-204ENST00000487984 S100A1P23297 94 aa8.5□□□□□ -1.05
SDC3-204ENST00000487984 ZNF138P52744 262 aa8.5□□□□□ -1.05
SDC3-204ENST00000487984 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
SDC3-204ENST00000487984 IBA57Q5T440 356 aaKnown RBP8.5□□□□□ -1.05
SDC3-204ENST00000487984 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
SDC3-204ENST00000487984 A0A096LPF7 62 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 TRBV7-9A0A0J9YWB2 115 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 GGTLC3B5MD39 225 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 SFTA3P0C7M3 94 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 CEBPGP53567 150 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
SDC3-204ENST00000487984 TTC32Q5I0X7 151 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 MRPL16Q9NX20 251 aaKnown RBP8.49□□□□□ -1.05
SDC3-204ENST00000487984 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
SDC3-204ENST00000487984 RBAKDNA6NC62 111 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 FBLL1A6NHQ2 334 aaKnown RBP8.48□□□□□ -1.05
SDC3-204ENST00000487984 F8W036 122 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 AKR1C3P42330 323 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 CYB561D1Q8N8Q1 229 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 C11orf52Q96A22 123 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 LRP1BQ9NZR2 4599 aa8.48□□□□□ -1.05
SDC3-204ENST00000487984 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
SDC3-204ENST00000487984 PEX7O00628 323 aa8.47□□□□□ -1.05
SDC3-204ENST00000487984 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
SDC3-204ENST00000487984 UBE2G1P62253 170 aa8.47□□□□□ -1.05
SDC3-204ENST00000487984 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 A0A1W2PPQ1 181 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 ZNF727A8MUV8 499 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 DIRC3C9JPN6 131 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 C9JQL5 133 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 PAX4O43316 350 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 TCRAP04437 139 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 ZNF415Q09FC8 603 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 MUC21Q5SSG8 566 aa8.46□□□□□ -1.06
SDC3-204ENST00000487984 SMIM7Q9BQ49 75 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms