RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 Q6ZTI0 123 aa6.62□□□□□ -1.35
LCN2-205ENST00000487719 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
LCN2-205ENST00000487719 C11orf72Q8NBR9 251 aa6.62□□□□□ -1.35
LCN2-205ENST00000487719 TXNDC17Q9BRA2 123 aa6.62□□□□□ -1.35
LCN2-205ENST00000487719 ZFP30Q9Y2G7 519 aa6.62□□□□□ -1.35
LCN2-205ENST00000487719 KLF12Q9Y4X4 402 aa6.62□□□□□ -1.35
LCN2-205ENST00000487719 TRAV34A0A0B4J273 112 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 SPINK4O60575 86 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 S100A4P26447 101 aaKnown RBP6.61□□□□□ -1.35
LCN2-205ENST00000487719 CCL18P55774 89 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 FAM3BP58499 235 aaPredicted RBP6.61□□□□□ -1.35
LCN2-205ENST00000487719 RNF212Q495C1 297 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 Q86TA4 180 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 C18orf15Q96N68 181 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 TP53TG3Q9ULZ0 132 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 DYNC2H1Q8NCM8 4307 aaKnown RBP6.61□□□□□ -1.35
LCN2-205ENST00000487719 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
LCN2-205ENST00000487719 PLECQ15149 4684 aaKnown RBP6.61□□□□□ -1.35
LCN2-205ENST00000487719 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 FABP5P3A8MUU1 101 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 H3BNG1 76 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 M0R2P5 195 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 TAGLN2P37802 199 aaKnown RBP6.6□□□□□ -1.35
LCN2-205ENST00000487719 SULT1A2P50226 295 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 FAM162BQ5T6X4 162 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 PCNPQ8WW12 178 aaKnown RBP6.6□□□□□ -1.35
LCN2-205ENST00000487719 MRPL16Q9NX20 251 aaKnown RBP6.6□□□□□ -1.35
LCN2-205ENST00000487719 GNG13Q9P2W3 67 aa6.6□□□□□ -1.35
LCN2-205ENST00000487719 TRAV1-1A0A0B4J248 108 aa6.59□□□□□ -1.35
LCN2-205ENST00000487719 IGLV2-11P01706 119 aa6.59□□□□□ -1.35
LCN2-205ENST00000487719 ORM1P02763 201 aa6.59□□□□□ -1.35
LCN2-205ENST00000487719 TYMSP04818 313 aa6.59□□□□□ -1.35
LCN2-205ENST00000487719 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
LCN2-205ENST00000487719 RYR3Q15413 4870 aa6.59□□□□□ -1.35
LCN2-205ENST00000487719 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.36
LCN2-205ENST00000487719 RYR2Q92736 4967 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 IGHV3-16A0A0C4DH30 117 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 A0A0J9YY99 117 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 TRBV6-1A0A0K0K1D8 114 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 PAX4O43316 350 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 CIDEAO60543 219 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 LTAP01374 205 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 IGHV3-53P01767 116 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 ASIPP42127 132 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 Q6ZQT7 251 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 C9orf62Q8N4C0 152 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 RASL10AQ92737 203 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 LINC00479Q96M42 142 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 MDFICQ9P1T7 246 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 PRO0255Q9UI72 69 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 ICOSQ9Y6W8 199 aa6.58□□□□□ -1.36
LCN2-205ENST00000487719 TRAV4A0A0B4J268 109 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 SCO2A0A1W2PP80 73 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 B4DEV8 164 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 GNRH2O43555 120 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 PDE6DO43924 150 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 ZNF80P51504 273 aaPredicted RBP6.57□□□□□ -1.36
LCN2-205ENST00000487719 MEF2BQ02080 365 aaPredicted RBP6.57□□□□□ -1.36
LCN2-205ENST00000487719 ZNF876PQ49A33 203 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 SOHLH1Q5JUK2 328 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 BAGE2Q86Y30 109 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 SYT8Q8NBV8 401 aa6.57□□□□□ -1.36
LCN2-205ENST00000487719 C9JCJ5 164 aa6.56□□□□□ -1.36
LCN2-205ENST00000487719 HOXA5P20719 270 aa6.56□□□□□ -1.36
LCN2-205ENST00000487719 ZC2HC1AQ96GY0 325 aa6.56□□□□□ -1.36
LCN2-205ENST00000487719 BIN3Q9NQY0 253 aa6.56□□□□□ -1.36
LCN2-205ENST00000487719 HHLA3Q9XRX5 114 aa6.56□□□□□ -1.36
LCN2-205ENST00000487719 M0R036 132 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 SH2D1AO60880 128 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 BCL2P10415 239 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 SRIP30626 198 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
LCN2-205ENST00000487719 ALKAL2Q6UX46 152 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 SH2D6Q7Z4S9 175 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 DAZAP1Q96EP5 407 aaKnown RBP6.55□□□□□ -1.36
LCN2-205ENST00000487719 VAX2Q9UIW0 290 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 PHLDA3Q9Y5J5 127 aa6.55□□□□□ -1.36
LCN2-205ENST00000487719 HYDINQ4G0P3 5121 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 A8MWV9 139 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 H3BVH4 76 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 RPL35P42766 123 aaKnown RBP6.54□□□□□ -1.36
LCN2-205ENST00000487719 GNG4P50150 75 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 PRR27Q6MZM9 219 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 NHLRC2Q8NBF2 726 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 C11orf52Q96A22 123 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 PTH2Q96A98 100 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 SMIM12Q96EX1 92 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 C9orf85Q96MD7 179 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 PRADC1Q9BSG0 188 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 MED9Q9NWA0 146 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms