RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 TREM1Q9NP99 234 aa16.9■□□□□ 0.3
SEMA3C-209ENST00000487621 TRAV4A0A0B4J268 109 aa16.89■□□□□ 0.29
SEMA3C-209ENST00000487621 M0R2P5 195 aa16.88■□□□□ 0.29
SEMA3C-209ENST00000487621 PTTG1O95997 202 aa16.88■□□□□ 0.29
SEMA3C-209ENST00000487621 ATP6V0CP27449 155 aa16.88■□□□□ 0.29
SEMA3C-209ENST00000487621 Q5BKY6 102 aa16.88■□□□□ 0.29
SEMA3C-209ENST00000487621 RAB24Q969Q5 203 aa16.88■□□□□ 0.29
SEMA3C-209ENST00000487621 TNFRSF18Q9Y5U5 241 aa16.88■□□□□ 0.29
SEMA3C-209ENST00000487621 GYPEP15421 78 aa16.87■□□□□ 0.29
SEMA3C-209ENST00000487621 SGK494Q96LW2 274 aa16.87■□□□□ 0.29
SEMA3C-209ENST00000487621 SERTM2A0A1B0GWG4 89 aa16.86■□□□□ 0.29
SEMA3C-209ENST00000487621 ORM1P02763 201 aa16.86■□□□□ 0.29
SEMA3C-209ENST00000487621 GCHFRP30047 84 aa16.86■□□□□ 0.29
SEMA3C-209ENST00000487621 SRIP30626 198 aa16.86■□□□□ 0.29
SEMA3C-209ENST00000487621 ZNF80P51504 273 aaPredicted RBP16.86■□□□□ 0.29
SEMA3C-209ENST00000487621 MED28Q9H204 178 aa16.86■□□□□ 0.29
SEMA3C-209ENST00000487621 TCRAP04437 139 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 SERF2P84101 59 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 MAPKAPK5-AS1Q8N8E1 139 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 C5orf17Q8NAS9 161 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 OR4C5Q8NGB2 326 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 SDF2L1Q9HCN8 221 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 C11orf21Q9P2W6 132 aa16.85■□□□□ 0.29
SEMA3C-209ENST00000487621 IGLV2-11P01706 119 aa16.84■□□□□ 0.29
SEMA3C-209ENST00000487621 WFDC10BQ8IUB3 73 aa16.84■□□□□ 0.29
SEMA3C-209ENST00000487621 KCNS1Q96KK3 526 aa16.84■□□□□ 0.29
SEMA3C-209ENST00000487621 SH3BGRL3Q9H299 93 aa16.84■□□□□ 0.29
SEMA3C-209ENST00000487621 LOC100131303A0A0U1RQF7 123 aa16.83■□□□□ 0.28
SEMA3C-209ENST00000487621 PCNPQ8WW12 178 aaKnown RBP16.83■□□□□ 0.28
SEMA3C-209ENST00000487621 ASB13Q8WXK3 278 aa16.83■□□□□ 0.28
SEMA3C-209ENST00000487621 GGTLC3B5MD39 225 aa16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 C9JCJ5 164 aa16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 MBP02144 154 aa16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 GATA1P15976 413 aaPredicted RBP16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 TNFSF18Q9UNG2 199 aa16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 PSG8Q9UQ74 426 aa16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 LY96Q9Y6Y9 160 aa16.82■□□□□ 0.28
SEMA3C-209ENST00000487621 RNF222A6NCQ9 220 aa16.81■□□□□ 0.28
SEMA3C-209ENST00000487621 GIPP09681 153 aaPredicted RBP16.81■□□□□ 0.28
SEMA3C-209ENST00000487621 DNAH10OSP0CZ25 163 aa16.81■□□□□ 0.28
SEMA3C-209ENST00000487621 TXNDC17Q9BRA2 123 aa16.81■□□□□ 0.28
SEMA3C-209ENST00000487621 NDFIP1Q9BT67 221 aa16.81■□□□□ 0.28
SEMA3C-209ENST00000487621 CXorf1O96002 111 aa16.8■□□□□ 0.28
SEMA3C-209ENST00000487621 SUMO1P63165 101 aaKnown RBP16.8■□□□□ 0.28
SEMA3C-209ENST00000487621 TMEM167BQ9NRX6 74 aa16.8■□□□□ 0.28
SEMA3C-209ENST00000487621 EPDR1Q9UM22 224 aa16.8■□□□□ 0.28
SEMA3C-209ENST00000487621 K7EP13 123 aa16.79■□□□□ 0.28
SEMA3C-209ENST00000487621 GCGP01275 180 aa16.79■□□□□ 0.28
SEMA3C-209ENST00000487621 DPPA3Q6W0C5 159 aa16.79■□□□□ 0.28
SEMA3C-209ENST00000487621 NFE4Q86UQ8 179 aa16.79■□□□□ 0.28
SEMA3C-209ENST00000487621 Q8N1X5 172 aa16.79■□□□□ 0.28
SEMA3C-209ENST00000487621 C9orf85Q96MD7 179 aa16.79■□□□□ 0.28
SEMA3C-209ENST00000487621 TRAV9-2A0A087WT02 112 aa16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 TAAR5O14804 337 aa16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 PFN1P07737 140 aaKnown RBP16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 FLI1Q01543 452 aaPredicted RBP16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 RPL7L1Q6DKI1 246 aaKnown RBP16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 TMEM75Q8N9X5 138 aa16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 ACTR3CQ9C0K3 210 aaPredicted RBP16.78■□□□□ 0.28
SEMA3C-209ENST00000487621 K7EQM0 130 aa16.77■□□□□ 0.28
SEMA3C-209ENST00000487621 RS1O15537 224 aa16.77■□□□□ 0.28
SEMA3C-209ENST00000487621 TIRAPP58753 221 aa16.77■□□□□ 0.28
SEMA3C-209ENST00000487621 ZNF726P1Q15940 193 aa16.77■□□□□ 0.28
SEMA3C-209ENST00000487621 CYB561D1Q8N8Q1 229 aa16.77■□□□□ 0.28
SEMA3C-209ENST00000487621 PGPEP1Q9NXJ5 209 aa16.77■□□□□ 0.28
SEMA3C-209ENST00000487621 FBLL1A6NHQ2 334 aaKnown RBP16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 FUSP35637 526 aaKnown RBP eCLIP16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 ERVFC1-1P60608 527 aa16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 ZNF876PQ49A33 203 aa16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 CFAP126Q5VTH2 177 aa16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 SH2D6Q7Z4S9 175 aa16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 PTH2Q96A98 100 aa16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 MSRB1Q9NZV6 116 aa16.76■□□□□ 0.27
SEMA3C-209ENST00000487621 A0A087WTM6 91 aa16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 A0A1W2PRE2 83 aa16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 RNASE3P12724 160 aaKnown RBP16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 EVI2AP22794 236 aa16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 SMUG1Q53HV7 270 aa16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 PRNTQ86SH4 94 aa16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 SLC25A29Q8N8R3 303 aa16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 INO80EQ8NBZ0 244 aaPredicted RBP16.75■□□□□ 0.27
SEMA3C-209ENST00000487621 G3V3Q6 166 aa16.74■□□□□ 0.27
SEMA3C-209ENST00000487621 LINC00479Q96M42 142 aa16.74■□□□□ 0.27
SEMA3C-209ENST00000487621 PGPEP1LA6NFU8 196 aa16.73■□□□□ 0.27
SEMA3C-209ENST00000487621 CIDEAO60543 219 aa16.73■□□□□ 0.27
SEMA3C-209ENST00000487621 FXYD6-FXYD2A0A087WZ82 144 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 TRBV6-4A0A1B0GX49 114 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 EREGO14944 169 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 ZNF506Q5JVG8 444 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 SAPCD1Q5SSQ6 148 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 CDPF1Q6NVV7 123 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 NHLRC2Q8NBF2 726 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 SCRT2Q9NQ03 307 aa16.72■□□□□ 0.27
SEMA3C-209ENST00000487621 BORCS7-ASMTA0A0B4J1R7 106 aa16.71■□□□□ 0.27
SEMA3C-209ENST00000487621 IGKV3D-20A0A0C4DH25 116 aa16.71■□□□□ 0.27
SEMA3C-209ENST00000487621 CTXND1A0A1B0GTU2 59 aa16.71■□□□□ 0.27
SEMA3C-209ENST00000487621 CRYGDP07320 174 aa16.71■□□□□ 0.27
SEMA3C-209ENST00000487621 ZFP69Q49AA0 526 aa16.71■□□□□ 0.27
SEMA3C-209ENST00000487621 TRAV34A0A0B4J273 112 aa16.7■□□□□ 0.26
SEMA3C-209ENST00000487621 C10orf126Q8N4M7 172 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms