RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 HSPG2P98160 4391 aa16.14■□□□□ 0.17
PLOD3-215ENST00000487563 IGHV3-16A0A0C4DH30 117 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 SERTM2A0A1B0GWG4 89 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 K7EQM0 130 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 TYMSP04818 313 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 STAG3L2P0CL84 134 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 STAG3L3P0CL85 134 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 ATP6V0CP27449 155 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 C5orf17Q8NAS9 161 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 RAB24Q969Q5 203 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 TVP23CQ96ET8 276 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 SGK494Q96LW2 274 aa16.13■□□□□ 0.17
PLOD3-215ENST00000487563 TRAV9-2A0A087WT02 112 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 C9JCJ5 164 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 MBP02144 154 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 GCHFRP30047 84 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 MAPKAPK5-AS1Q8N8E1 139 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 ASB13Q8WXK3 278 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 TXNDC17Q9BRA2 123 aa16.12■□□□□ 0.17
PLOD3-215ENST00000487563 KRTAP10-2P60368 255 aa16.11■□□□□ 0.17
PLOD3-215ENST00000487563 LY96Q9Y6Y9 160 aa16.11■□□□□ 0.17
PLOD3-215ENST00000487563 EREGO14944 169 aa16.1■□□□□ 0.17
PLOD3-215ENST00000487563 TCRAP04437 139 aa16.1■□□□□ 0.17
PLOD3-215ENST00000487563 SERF2P84101 59 aa16.1■□□□□ 0.17
PLOD3-215ENST00000487563 Q6ZRN7 208 aaPredicted RBP16.1■□□□□ 0.17
PLOD3-215ENST00000487563 TMEM167BQ9NRX6 74 aa16.1■□□□□ 0.17
PLOD3-215ENST00000487563 ERVFC1-1P60608 527 aa16.09■□□□□ 0.17
PLOD3-215ENST00000487563 ZFP69Q49AA0 526 aa16.09■□□□□ 0.17
PLOD3-215ENST00000487563 NFE4Q86UQ8 179 aa16.09■□□□□ 0.17
PLOD3-215ENST00000487563 INO80EQ8NBZ0 244 aaPredicted RBP16.09■□□□□ 0.17
PLOD3-215ENST00000487563 ACTR3CQ9C0K3 210 aaPredicted RBP16.09■□□□□ 0.17
PLOD3-215ENST00000487563 SH3BGRL3Q9H299 93 aa16.09■□□□□ 0.17
PLOD3-215ENST00000487563 CXorf1O96002 111 aa16.08■□□□□ 0.16
PLOD3-215ENST00000487563 WFDC10BQ8IUB3 73 aa16.08■□□□□ 0.16
PLOD3-215ENST00000487563 KRTAP4-5Q9BYR2 181 aa16.08■□□□□ 0.16
PLOD3-215ENST00000487563 GIPP09681 153 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-215ENST00000487563 EVI2AP22794 236 aa16.07■□□□□ 0.16
PLOD3-215ENST00000487563 SUMO1P63165 101 aaKnown RBP16.07■□□□□ 0.16
PLOD3-215ENST00000487563 NHLRC2Q8NBF2 726 aa16.07■□□□□ 0.16
PLOD3-215ENST00000487563 PSG8Q9UQ74 426 aa16.07■□□□□ 0.16
PLOD3-215ENST00000487563 TAAR5O14804 337 aa16.06■□□□□ 0.16
PLOD3-215ENST00000487563 GCGP01275 180 aa16.06■□□□□ 0.16
PLOD3-215ENST00000487563 PRNTQ86SH4 94 aa16.06■□□□□ 0.16
PLOD3-215ENST00000487563 SUN5Q8TC36 379 aa16.06■□□□□ 0.16
PLOD3-215ENST00000487563 TNFSF18Q9UNG2 199 aa16.06■□□□□ 0.16
PLOD3-215ENST00000487563 TNFRSF18Q9Y5U5 241 aa16.06■□□□□ 0.16
PLOD3-215ENST00000487563 FXYD6-FXYD2A0A087WZ82 144 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 BORCS7-ASMTA0A0B4J1R7 106 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 LOC100131303A0A0U1RQF7 123 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 FBLL1A6NHQ2 334 aaKnown RBP16.05■□□□□ 0.16
PLOD3-215ENST00000487563 GGTLC3B5MD39 225 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 FLI1Q01543 452 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-215ENST00000487563 ZNF876PQ49A33 203 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 SMUG1Q53HV7 270 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 Q5BKY6 102 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 SH2D6Q7Z4S9 175 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 CYB561D1Q8N8Q1 229 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 EPDR1Q9UM22 224 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 ABCA13Q86UQ4 5058 aa16.05■□□□□ 0.16
PLOD3-215ENST00000487563 K7EP13 123 aa16.04■□□□□ 0.16
PLOD3-215ENST00000487563 PPT1P50897 306 aa16.04■□□□□ 0.16
PLOD3-215ENST00000487563 ZNF80P51504 273 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-215ENST00000487563 PFN1P07737 140 aaKnown RBP16.03■□□□□ 0.16
PLOD3-215ENST00000487563 GATA1P15976 413 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-215ENST00000487563 RPL7L1Q6DKI1 246 aaKnown RBP16.03■□□□□ 0.16
PLOD3-215ENST00000487563 TMEM75Q8N9X5 138 aa16.03■□□□□ 0.16
PLOD3-215ENST00000487563 MSRB1Q9NZV6 116 aa16.03■□□□□ 0.16
PLOD3-215ENST00000487563 C11orf21Q9P2W6 132 aa16.03■□□□□ 0.16
PLOD3-215ENST00000487563 APOBP04114 4563 aaKnown RBP16.02■□□□□ 0.16
PLOD3-215ENST00000487563 DNAH10OSP0CZ25 163 aa16.02■□□□□ 0.16
PLOD3-215ENST00000487563 RNF222A6NCQ9 220 aa16.01■□□□□ 0.15
PLOD3-215ENST00000487563 IGLV2-11P01706 119 aa16.01■□□□□ 0.15
PLOD3-215ENST00000487563 SAPCD1Q5SSQ6 148 aa16.01■□□□□ 0.15
PLOD3-215ENST00000487563 PRADC1Q9BSG0 188 aa16.01■□□□□ 0.15
PLOD3-215ENST00000487563 PGPEP1Q9NXJ5 209 aa16.01■□□□□ 0.15
PLOD3-215ENST00000487563 A0A1W2PRE2 83 aa16■□□□□ 0.15
PLOD3-215ENST00000487563 IFNA7P01567 189 aa16■□□□□ 0.15
PLOD3-215ENST00000487563 CRYGDP07320 174 aa16■□□□□ 0.15
PLOD3-215ENST00000487563 C10orf126Q8N4M7 172 aa16■□□□□ 0.15
PLOD3-215ENST00000487563 CTXND1A0A1B0GTU2 59 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 RS1O15537 224 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 CIDEAO60543 219 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 RHOHQ15669 191 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 CFAP126Q5VTH2 177 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 Q8N1X5 172 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 SLC25A29Q8N8R3 303 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 OR2T35Q8NGX2 323 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 C9orf85Q96MD7 179 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 DNAH5Q8TE73 4624 aa15.99■□□□□ 0.15
PLOD3-215ENST00000487563 IGHV3-73A0A0B4J1V6 119 aa15.98■□□□□ 0.15
PLOD3-215ENST00000487563 FUSP35637 526 aaKnown RBP eCLIP15.98■□□□□ 0.15
PLOD3-215ENST00000487563 TIRAPP58753 221 aa15.98■□□□□ 0.15
PLOD3-215ENST00000487563 UBE2G2P60604 165 aa15.98■□□□□ 0.15
PLOD3-215ENST00000487563 CDPF1Q6NVV7 123 aa15.98■□□□□ 0.15
PLOD3-215ENST00000487563 SCRT2Q9NQ03 307 aa15.98■□□□□ 0.15
PLOD3-215ENST00000487563 A0A087WTM6 91 aa15.97■□□□□ 0.15
PLOD3-215ENST00000487563 TRAV34A0A0B4J273 112 aa15.97■□□□□ 0.15
PLOD3-215ENST00000487563 ZNF506Q5JVG8 444 aa15.97■□□□□ 0.15
PLOD3-215ENST00000487563 AKR1C8PQ5T2L2 129 aa15.97■□□□□ 0.15
PLOD3-215ENST00000487563 DPPA3Q6W0C5 159 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms