RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 HSD17B11Q8NBQ5 300 aa16.7■□□□□ 0.26
LIME1-206ENST00000487026 OR4C5Q8NGB2 326 aa16.7■□□□□ 0.26
LIME1-206ENST00000487026 PCNPQ8WW12 178 aaKnown RBP16.7■□□□□ 0.26
LIME1-206ENST00000487026 TRAV4A0A0B4J268 109 aa16.69■□□□□ 0.26
LIME1-206ENST00000487026 M0R2P5 195 aa16.69■□□□□ 0.26
LIME1-206ENST00000487026 ARL6IP6Q8N6S5 226 aa16.69■□□□□ 0.26
LIME1-206ENST00000487026 LY96Q9Y6Y9 160 aa16.69■□□□□ 0.26
LIME1-206ENST00000487026 LOC100131303A0A0U1RQF7 123 aa16.68■□□□□ 0.26
LIME1-206ENST00000487026 CDC34P49427 236 aaPredicted RBP16.68■□□□□ 0.26
LIME1-206ENST00000487026 Q8N1X5 172 aa16.68■□□□□ 0.26
LIME1-206ENST00000487026 ORM1P02763 201 aa16.67■□□□□ 0.26
LIME1-206ENST00000487026 RAB24Q969Q5 203 aa16.67■□□□□ 0.26
LIME1-206ENST00000487026 SDF2L1Q9HCN8 221 aa16.67■□□□□ 0.26
LIME1-206ENST00000487026 SCRT2Q9NQ03 307 aa16.67■□□□□ 0.26
LIME1-206ENST00000487026 TRAV9-2A0A087WT02 112 aa16.66■□□□□ 0.26
LIME1-206ENST00000487026 STAG3L2P0CL84 134 aa16.66■□□□□ 0.26
LIME1-206ENST00000487026 STAG3L3P0CL85 134 aa16.66■□□□□ 0.26
LIME1-206ENST00000487026 C9JCJ5 164 aa16.65■□□□□ 0.26
LIME1-206ENST00000487026 ATP6V0CP27449 155 aa16.65■□□□□ 0.26
LIME1-206ENST00000487026 ZNF80P51504 273 aaPredicted RBP16.65■□□□□ 0.26
LIME1-206ENST00000487026 OR2G3Q8NGZ4 309 aa16.65■□□□□ 0.26
LIME1-206ENST00000487026 ASB13Q8WXK3 278 aa16.65■□□□□ 0.26
LIME1-206ENST00000487026 KCNS1Q96KK3 526 aa16.65■□□□□ 0.26
LIME1-206ENST00000487026 C11orf21Q9P2W6 132 aa16.65■□□□□ 0.26
LIME1-206ENST00000487026 EREGO14944 169 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 DNAH10OSP0CZ25 163 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 GCHFRP30047 84 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 ERVFC1-1P60608 527 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 Q5BKY6 102 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 NFE4Q86UQ8 179 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 TXNDC17Q9BRA2 123 aa16.64■□□□□ 0.25
LIME1-206ENST00000487026 TCRAP04437 139 aa16.63■□□□□ 0.25
LIME1-206ENST00000487026 AQP10Q96PS8 301 aa16.63■□□□□ 0.25
LIME1-206ENST00000487026 NDFIP1Q9BT67 221 aa16.63■□□□□ 0.25
LIME1-206ENST00000487026 MED28Q9H204 178 aa16.63■□□□□ 0.25
LIME1-206ENST00000487026 SH3BGRL3Q9H299 93 aa16.63■□□□□ 0.25
LIME1-206ENST00000487026 PGPEP1Q9NXJ5 209 aa16.63■□□□□ 0.25
LIME1-206ENST00000487026 EVI2AP22794 236 aa16.62■□□□□ 0.25
LIME1-206ENST00000487026 SUMO1P63165 101 aaKnown RBP16.62■□□□□ 0.25
LIME1-206ENST00000487026 C5orf17Q8NAS9 161 aa16.62■□□□□ 0.25
LIME1-206ENST00000487026 NHLRC2Q8NBF2 726 aa16.62■□□□□ 0.25
LIME1-206ENST00000487026 SUN5Q8TC36 379 aa16.62■□□□□ 0.25
LIME1-206ENST00000487026 PSMG3Q9BT73 122 aaPredicted RBP16.62■□□□□ 0.25
LIME1-206ENST00000487026 MSRB1Q9NZV6 116 aa16.62■□□□□ 0.25
LIME1-206ENST00000487026 PSG8Q9UQ74 426 aa16.62■□□□□ 0.25
LIME1-206ENST00000487026 GATA1P15976 413 aaPredicted RBP16.61■□□□□ 0.25
LIME1-206ENST00000487026 TMEM75Q8N9X5 138 aa16.61■□□□□ 0.25
LIME1-206ENST00000487026 A0A087WTM6 91 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 SERTM2A0A1B0GWG4 89 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 GCGP01275 180 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 IGLV2-11P01706 119 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 ZNF876PQ49A33 203 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 DPPA3Q6W0C5 159 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 PRNTQ86SH4 94 aa16.6■□□□□ 0.25
LIME1-206ENST00000487026 IGHV3-73A0A0B4J1V6 119 aa16.59■□□□□ 0.25
LIME1-206ENST00000487026 FBLL1A6NHQ2 334 aaKnown RBP16.59■□□□□ 0.25
LIME1-206ENST00000487026 GGTLC3B5MD39 225 aa16.59■□□□□ 0.25
LIME1-206ENST00000487026 CRYGDP07320 174 aa16.59■□□□□ 0.25
LIME1-206ENST00000487026 SERF2P84101 59 aa16.59■□□□□ 0.25
LIME1-206ENST00000487026 EPDR1Q9UM22 224 aa16.59■□□□□ 0.25
LIME1-206ENST00000487026 K7EQM0 130 aa16.58■□□□□ 0.24
LIME1-206ENST00000487026 TAAR5O14804 337 aa16.58■□□□□ 0.24
LIME1-206ENST00000487026 CXorf1O96002 111 aa16.58■□□□□ 0.24
LIME1-206ENST00000487026 MBP02144 154 aa16.58■□□□□ 0.24
LIME1-206ENST00000487026 FLI1Q01543 452 aaPredicted RBP16.58■□□□□ 0.24
LIME1-206ENST00000487026 CFAP126Q5VTH2 177 aa16.58■□□□□ 0.24
LIME1-206ENST00000487026 SLC25A29Q8N8R3 303 aa16.58■□□□□ 0.24
LIME1-206ENST00000487026 ACTR3CQ9C0K3 210 aaPredicted RBP16.58■□□□□ 0.24
LIME1-206ENST00000487026 RS1O15537 224 aa16.57■□□□□ 0.24
LIME1-206ENST00000487026 TMEM167BQ9NRX6 74 aa16.57■□□□□ 0.24
LIME1-206ENST00000487026 K7EP13 123 aa16.56■□□□□ 0.24
LIME1-206ENST00000487026 PFN1P07737 140 aaKnown RBP16.56■□□□□ 0.24
LIME1-206ENST00000487026 PPT1P50897 306 aa16.56■□□□□ 0.24
LIME1-206ENST00000487026 SMUG1Q53HV7 270 aa16.56■□□□□ 0.24
LIME1-206ENST00000487026 SH2D6Q7Z4S9 175 aa16.56■□□□□ 0.24
LIME1-206ENST00000487026 LINC00479Q96M42 142 aa16.56■□□□□ 0.24
LIME1-206ENST00000487026 TNFSF18Q9UNG2 199 aa16.56■□□□□ 0.24
LIME1-206ENST00000487026 PGPEP1LA6NFU8 196 aa16.55■□□□□ 0.24
LIME1-206ENST00000487026 RPL7L1Q6DKI1 246 aaKnown RBP16.55■□□□□ 0.24
LIME1-206ENST00000487026 CYB561D1Q8N8Q1 229 aa16.55■□□□□ 0.24
LIME1-206ENST00000487026 C9orf85Q96MD7 179 aa16.55■□□□□ 0.24
LIME1-206ENST00000487026 CDPF1Q6NVV7 123 aa16.54■□□□□ 0.24
LIME1-206ENST00000487026 TRAV34A0A0B4J273 112 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 IGHV3-38A0A0C4DH36 116 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 TIRAPP58753 221 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 KRTAP10-1P60331 282 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 ZFP69Q49AA0 526 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 ZNF506Q5JVG8 444 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 C10orf126Q8N4M7 172 aa16.53■□□□□ 0.24
LIME1-206ENST00000487026 INO80EQ8NBZ0 244 aaPredicted RBP16.53■□□□□ 0.24
LIME1-206ENST00000487026 RNF222A6NCQ9 220 aa16.52■□□□□ 0.24
LIME1-206ENST00000487026 GIPP09681 153 aaPredicted RBP16.52■□□□□ 0.24
LIME1-206ENST00000487026 RNASE3P12724 160 aaKnown RBP16.52■□□□□ 0.24
LIME1-206ENST00000487026 XGP55808 180 aa16.52■□□□□ 0.24
LIME1-206ENST00000487026 ZNF726P1Q15940 193 aa16.52■□□□□ 0.24
LIME1-206ENST00000487026 PRADC1Q9BSG0 188 aa16.52■□□□□ 0.24
LIME1-206ENST00000487026 FXYD6-FXYD2A0A087WZ82 144 aa16.51■□□□□ 0.23
LIME1-206ENST00000487026 TRBV6-4A0A1B0GX49 114 aa16.51■□□□□ 0.23
LIME1-206ENST00000487026 OR10J3Q5JRS4 329 aa16.51■□□□□ 0.23
LIME1-206ENST00000487026 SAPCD1Q5SSQ6 148 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms