RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SNAI2O43623 268 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 CFHR3Q02985 330 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 Q6ZQT7 251 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 OR10J6PQ8NGY7 276 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 NXT2Q9NPJ8 142 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 SMIM15Q7Z3B0 74 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 DPF1Q92782 380 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 IFI27L1Q96BM0 104 aa13.66□□□□□ -0.22
PDLIM7-207ENST00000486828 EVI2AP22794 236 aa13.65□□□□□ -0.22
PDLIM7-207ENST00000486828 CACNG7P62955 275 aa13.65□□□□□ -0.22
PDLIM7-207ENST00000486828 ZNF580Q9UK33 172 aa13.65□□□□□ -0.22
PDLIM7-207ENST00000486828 CSMD2Q7Z408 3487 aa13.65□□□□□ -0.22
PDLIM7-207ENST00000486828 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 NPSP0C0P6 89 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 COX8AP10176 69 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 SLC25A16P16260 332 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 LCNL1Q6ZST4 164 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 ZFAND2AQ8N6M9 145 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 NRGNQ92686 78 aa13.64□□□□□ -0.23
PDLIM7-207ENST00000486828 MAP1AP78559 2803 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-207ENST00000486828 GATA1P15976 413 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-207ENST00000486828 MPV17L2Q567V2 206 aa13.63□□□□□ -0.23
PDLIM7-207ENST00000486828 SPANXN1Q5VSR9 72 aa13.63□□□□□ -0.23
PDLIM7-207ENST00000486828 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
PDLIM7-207ENST00000486828 ITPR2Q14571 2701 aa13.63□□□□□ -0.23
PDLIM7-207ENST00000486828 FLNBO75369 2602 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 FCER1GP30273 86 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 OR2K2Q8NGT1 345 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 ORAOV1Q8WV07 137 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 DAZ1Q9NQZ3 744 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 H3BVH4 76 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 LEPP41159 167 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 TM4SF20Q53R12 229 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 Q8N8P6 123 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 FAM19A4Q96LR4 140 aa13.62□□□□□ -0.23
PDLIM7-207ENST00000486828 ANKRD17O75179 2603 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 IGLV2-18A0A075B6J9 118 aa13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 NUDT3O95989 172 aa13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 LINC01356Q8N9X3 169 aa13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 OR1N2Q8NGR9 330 aa13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 PEF1Q9UBV8 284 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 UFC1Q9Y3C8 167 aa13.61□□□□□ -0.23
PDLIM7-207ENST00000486828 J3KRW8 73 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 DEFB125Q8N687 156 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 SMPXQ9UHP9 88 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 COX11Q9Y6N1 276 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 K7EMT4 169 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 DEFB1P60022 68 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 KRTAP10-9P60411 292 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 BVES-AS1Q5T3Y7 98 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 NRACQ8N912 160 aa13.6□□□□□ -0.23
PDLIM7-207ENST00000486828 DEFB112Q30KQ8 113 aa13.59□□□□□ -0.23
PDLIM7-207ENST00000486828 WFDC3Q8IUB2 231 aa13.59□□□□□ -0.23
PDLIM7-207ENST00000486828 APRG1Q8IVJ8 170 aa13.59□□□□□ -0.23
PDLIM7-207ENST00000486828 A0A096LNT2 108 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 TRBV7-9A0A0J9YWB2 115 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 IGHV4-59P01825 116 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 PSMB8P28062 276 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 C2orf91Q6ZV80 131 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 C18orf15Q96N68 181 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 ZFHX3Q15911 3703 aa13.58□□□□□ -0.23
PDLIM7-207ENST00000486828 IGKV3-7A0A075B6H7 116 aa13.58□□□□□ -0.24
PDLIM7-207ENST00000486828 TRAV26-2A0A0B4J265 109 aa13.58□□□□□ -0.24
PDLIM7-207ENST00000486828 F6UB75 175 aa13.58□□□□□ -0.24
PDLIM7-207ENST00000486828 FGF6P10767 208 aa13.58□□□□□ -0.24
PDLIM7-207ENST00000486828 J3QLI3 93 aa13.57□□□□□ -0.24
PDLIM7-207ENST00000486828 ASIPP42127 132 aa13.57□□□□□ -0.24
PDLIM7-207ENST00000486828 Q6ZVH6 145 aa13.57□□□□□ -0.24
PDLIM7-207ENST00000486828 TMEM158Q8WZ71 300 aa13.57□□□□□ -0.24
PDLIM7-207ENST00000486828 MRAP2Q96G30 205 aa13.57□□□□□ -0.24
PDLIM7-207ENST00000486828 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
PDLIM7-207ENST00000486828 ANXA2RQ3ZCQ2 193 aa13.56□□□□□ -0.24
PDLIM7-207ENST00000486828 RNASE4P34096 147 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-207ENST00000486828 DKK2Q9UBU2 259 aa13.56□□□□□ -0.24
PDLIM7-207ENST00000486828 NOTCH2Q04721 2471 aa13.55□□□□□ -0.24
PDLIM7-207ENST00000486828 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
PDLIM7-207ENST00000486828 EDN2P20800 178 aa13.55□□□□□ -0.24
PDLIM7-207ENST00000486828 S100A4P26447 101 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-207ENST00000486828 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
PDLIM7-207ENST00000486828 LAGE3Q14657 143 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 ODF1Q14990 250 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 BOD1L2Q8IYS8 172 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 CCDC168Q8NDH2 2452 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 M0R381 172 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 CD5LO43866 347 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 SRD5A1P18405 259 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 ID1P41134 155 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 ZMAT4Q9H898 229 aa13.54□□□□□ -0.24
PDLIM7-207ENST00000486828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.54□□□□□ -0.242e-7■■■□□ 16.9
PDLIM7-207ENST00000486828 DCANP1Q8TF63 244 aa13.53□□□□□ -0.24
PDLIM7-207ENST00000486828 PHLDA3Q9Y5J5 127 aa13.53□□□□□ -0.24
PDLIM7-207ENST00000486828 SELENOKQ9Y6D0 94 aa13.53□□□□□ -0.24
PDLIM7-207ENST00000486828 TAX1BP3O14907 124 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 ATP5LO75964 103 aa13.52□□□□□ -0.24
PDLIM7-207ENST00000486828 TGFAP01135 160 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms