RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 LY6LH3BQJ8 138 aa10.27□□□□□ -0.76
HMGN1-216ENST00000486741 TNFRSF13BO14836 293 aaPredicted RBP10.27□□□□□ -0.76
HMGN1-216ENST00000486741 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.76
HMGN1-216ENST00000486741 JMJD8Q96S16 334 aa10.27□□□□□ -0.76
HMGN1-216ENST00000486741 MUC3AQ02505 3323 aa10.27□□□□□ -0.76
HMGN1-216ENST00000486741 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 CCL25O15444 150 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 FAM231BA6NCW3 169 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 ATP5LO75964 103 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 NPYP01303 97 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 CKS1BP61024 79 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 NSUN5P1Q3KNT7 163 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 Q71RC1 249 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-216ENST00000486741 H7C2G1 150 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.77
HMGN1-216ENST00000486741 OR11H12B2RN74 326 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 DEFB131AP59861 70 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 GTSCR1Q86UQ5 136 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 OR11H1Q8NG94 326 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 OR11H2Q8NH07 326 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 IGLC2P0DOY2 106 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 UNQ9165/PRO28630Q6UXU0 137 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 WIPF2Q8TF74 440 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-216ENST00000486741 LOC400499M0QZD8 3231 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 WI2-2373I1.2A0A1W2PRP0 233 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 TMEM238C9JI98 176 aa10.26□□□□□ -0.77
HMGN1-216ENST00000486741 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGN1-216ENST00000486741 NDUFA4O00483 81 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 PF4P02776 101 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 ZNF418Q8TF45 676 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-216ENST00000486741 PRSS2P07478 247 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 MTURNQ8N3F0 131 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 AJUBAQ96IF1 538 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 ST20Q9HBF5 79 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 SIGLEC8Q9NYZ4 499 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 KLF12Q9Y4X4 402 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 NEGR1Q7Z3B1 354 aa10.25□□□□□ -0.77
HMGN1-216ENST00000486741 IGLL1P15814 213 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 GATA3P23771 443 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 RRN3P1Q2M238 152 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 ANKRD17O75179 2603 aaKnown RBP10.24□□□□□ -0.77
HMGN1-216ENST00000486741 TNFRSF18Q9Y5U5 241 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 GDF5OSQ5U4N7 250 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 LYRM7Q5U5X0 104 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 DSCAML1Q8TD84 2053 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 GNRH2O43555 120 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 CDKN1BP46527 198 aa10.24□□□□□ -0.77
HMGN1-216ENST00000486741 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
HMGN1-216ENST00000486741 NHP2Q9NX24 153 aaKnown RBP10.23□□□□□ -0.77
HMGN1-216ENST00000486741 DMXL2Q8TDJ6 3036 aa10.23□□□□□ -0.77
HMGN1-216ENST00000486741 RAI1Q7Z5J4 1906 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-216ENST00000486741 LAGE3Q14657 143 aa10.23□□□□□ -0.77
HMGN1-216ENST00000486741 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
HMGN1-216ENST00000486741 PTPRBP23467 1997 aa10.23□□□□□ -0.77
HMGN1-216ENST00000486741 ADGRG4Q8IZF6 3080 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 STHQ8IWL8 128 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 IGHV7-4-1A0A0J9YVY3 117 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
HMGN1-216ENST00000486741 CD300EQ496F6 205 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-216ENST00000486741 IGHV3-64A0A075B6Q5 118 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 HIST2H2BCQ6DN03 193 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 HIST2H2BDQ6DRA6 164 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 DPH3P1Q9H4G8 78 aa10.22□□□□□ -0.77
HMGN1-216ENST00000486741 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
HMGN1-216ENST00000486741 DPM2O94777 84 aa10.21□□□□□ -0.77
HMGN1-216ENST00000486741 ESDP10768 282 aa10.21□□□□□ -0.77
HMGN1-216ENST00000486741 PAX2Q02962 417 aa10.21□□□□□ -0.77
HMGN1-216ENST00000486741 TEX29Q8N6K0 151 aa10.21□□□□□ -0.77
HMGN1-216ENST00000486741 ZC2HC1BQ5TFG8 222 aa10.21□□□□□ -0.77
HMGN1-216ENST00000486741 SAP30O75446 220 aa10.21□□□□□ -0.78
HMGN1-216ENST00000486741 ZNF80P51504 273 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-216ENST00000486741 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.78
HMGN1-216ENST00000486741 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.78
HMGN1-216ENST00000486741 IGKCP01834 107 aa10.21□□□□□ -0.78
HMGN1-216ENST00000486741 MRPL52Q86TS9 123 aaKnown RBP10.21□□□□□ -0.78
HMGN1-216ENST00000486741 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 ZNF876PQ49A33 203 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 C19orf71A6NCJ1 209 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 XCL2Q9UBD3 114 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 DMXL1Q9Y485 3027 aa10.2□□□□□ -0.78
HMGN1-216ENST00000486741 PPP1R17O96001 155 aa10.19□□□□□ -0.78
HMGN1-216ENST00000486741 C10orf99Q6UWK7 81 aa10.19□□□□□ -0.78
HMGN1-216ENST00000486741 MLST8Q9BVC4 326 aa10.19□□□□□ -0.78
HMGN1-216ENST00000486741 ORMDL2Q53FV1 153 aa10.19□□□□□ -0.78
HMGN1-216ENST00000486741 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
HMGN1-216ENST00000486741 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
HMGN1-216ENST00000486741 LGALS3P17931 250 aaKnown RBP10.19□□□□□ -0.78
HMGN1-216ENST00000486741 RPL35AP18077 110 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms