RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 NPSP0C0P6 89 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 FAM106CPP0CH98 169 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 TMEM11P17152 192 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 SEC11AP67812 179 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 EBI3Q14213 229 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 LGALS9CQ6DKI2 356 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 NDUFA11Q86Y39 141 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 ATP6V0BQ99437 205 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 CITED2Q99967 270 aaPredicted RBP6.93□□□□□ -1.3
COL12A1-208ENST00000486533 SCRT2Q9NQ03 307 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 U3KQK5 164 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 A0A1W2PRX2 142 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 SH2D1AO60880 128 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 TFPI2P48307 235 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 FAM104BQ5XKR9 115 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 SMIM15Q7Z3B0 74 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 OR4C5Q8NGB2 326 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 OR9G4Q8NGQ1 327 aa6.92□□□□□ -1.3
COL12A1-208ENST00000486533 A0A087X0K7 114 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 A6NDN8 102 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 NCBP2LA6PVI3 153 aaKnown RBP6.91□□□□□ -1.3
COL12A1-208ENST00000486533 CSN3P07498 182 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 COX8AP10176 69 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 FBLN7Q53RD9 439 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
COL12A1-208ENST00000486533 AP1S3Q96PC3 154 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 PRR25Q96S07 402 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 ASCL2Q99929 193 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 MAP1LC3AQ9H492 121 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 SIVA1O15304 175 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 PRB2P02812 416 aaPredicted RBP6.91□□□□□ -1.3
COL12A1-208ENST00000486533 PF4V1P10720 104 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 CKS2P33552 79 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 VAMP3Q15836 100 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 KLK9Q2XQG4 91 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 BEAN1Q3B7T3 259 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 KHDC1LQ5JSQ8 128 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 LYZL1Q6UWQ5 148 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 Q8N6K4 173 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
COL12A1-208ENST00000486533 PEF1Q9UBV8 284 aaKnown RBP6.91□□□□□ -1.3
COL12A1-208ENST00000486533 KLK9Q9UKQ9 250 aa6.91□□□□□ -1.3
COL12A1-208ENST00000486533 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 NUDT3O95989 172 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 GPR183P32249 361 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 MAJINQ3KP22 176 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 DEFB125Q8N687 156 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 OR4X2Q8NGF9 303 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 SMPXQ9UHP9 88 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.31
COL12A1-208ENST00000486533 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 ZNF785A8K8V0 405 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 D6R8Y8 96 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 K7EP13 123 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 PF4P02776 101 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 TWIST1Q15672 202 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 ASPHD1Q5U4P2 390 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 UNQ5815/PRO19632Q6UWF5 114 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 GTF2H5Q6ZYL4 71 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 EEF1AKMT3Q96AZ1 226 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 CNFNQ9BYD5 112 aa6.89□□□□□ -1.31
COL12A1-208ENST00000486533 TSSC4Q9Y5U2 329 aaPredicted RBP6.89□□□□□ -1.31
COL12A1-208ENST00000486533 TRBV7-1A0A0A6YYK4 115 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 M0R3E3 92 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 CACNG7P62955 275 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 RHOGP84095 191 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 HSD52Q0P140 79 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 MRPL51Q4U2R6 128 aaKnown RBP6.88□□□□□ -1.31
COL12A1-208ENST00000486533 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 TCTEX1D4Q5JR98 221 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
COL12A1-208ENST00000486533 C10orf99Q6UWK7 81 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 IFI27L1Q96BM0 104 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 METTL26Q96S19 204 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 SIGLEC8Q9NYZ4 499 aa6.88□□□□□ -1.31
COL12A1-208ENST00000486533 TIMM8BQ9Y5J9 83 aaPredicted RBP6.88□□□□□ -1.31
COL12A1-208ENST00000486533 OR2T8A6NH00 312 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 H0Y8G0 127 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 ATP5LO75964 103 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
COL12A1-208ENST00000486533 CRIP1P50238 77 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 TMEM78Q5T7P6 136 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 LENEPQ9Y5L5 61 aa6.87□□□□□ -1.31
COL12A1-208ENST00000486533 IGKV2-40A0A087WW87 121 aaPredicted RBP6.86□□□□□ -1.31
COL12A1-208ENST00000486533 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 CCL25O15444 150 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 IGKV2D-40P01614 121 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms