RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PPBPP02775 128 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 CACNG7P62955 275 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 TDRG1Q3Y452 100 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 WFDC3Q8IUB2 231 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 RNF185Q96GF1 192 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 NDUFAF3Q9BU61 184 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 TLN2Q9Y4G6 2542 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 IGHV4-4A0A075B6R2 117 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 OR10AG1Q8NH19 301 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 C14orf144Q96I85 54 aa15.31■□□□□ 0.04
HPS3-206ENST00000486530 SNRPD3P62318 126 aaKnown RBP15.3■□□□□ 0.04
HPS3-206ENST00000486530 TMEM70Q9BUB7 260 aa15.3■□□□□ 0.04
HPS3-206ENST00000486530 PAM16Q9Y3D7 125 aa15.3■□□□□ 0.04
HPS3-206ENST00000486530 K7EQG2 157 aa15.29■□□□□ 0.04
HPS3-206ENST00000486530 SIGLEC8Q9NYZ4 499 aa15.29■□□□□ 0.04
HPS3-206ENST00000486530 LAMTOR2Q9Y2Q5 125 aa15.29■□□□□ 0.04
HPS3-206ENST00000486530 DNAJC9-AS1A6NH13 148 aa15.29■□□□□ 0.04
HPS3-206ENST00000486530 IFI27P40305 119 aaPredicted RBP15.29■□□□□ 0.04
HPS3-206ENST00000486530 SMIM15Q7Z3B0 74 aa15.29■□□□□ 0.04
HPS3-206ENST00000486530 HSPB8Q9UJY1 196 aa15.29■□□□□ 0.04
HPS3-206ENST00000486530 H3BVH4 76 aa15.28■□□□□ 0.04
HPS3-206ENST00000486530 CRXO43186 299 aaPredicted RBP15.28■□□□□ 0.04
HPS3-206ENST00000486530 RNASE4P34096 147 aaKnown RBP15.28■□□□□ 0.04
HPS3-206ENST00000486530 C4orf3Q8WVX3 66 aa15.28■□□□□ 0.04
HPS3-206ENST00000486530 KLLNB2CW77 178 aa15.27■□□□□ 0.04
HPS3-206ENST00000486530 SMKR1H3BMG3 65 aa15.27■□□□□ 0.04
HPS3-206ENST00000486530 NPYP01303 97 aa15.27■□□□□ 0.04
HPS3-206ENST00000486530 TFPI2P48307 235 aa15.27■□□□□ 0.04
HPS3-206ENST00000486530 SPANXN1Q5VSR9 72 aa15.27■□□□□ 0.04
HPS3-206ENST00000486530 LOC389332A0A1B0GUA5 103 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 LINC01619G3V211 115 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 NCR2O95944 276 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 ZNF688P0C7X2 276 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 MED14OSP0DP75 135 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 ASIPP42127 132 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 PSMG4Q5JS54 123 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 Q6ZSV7 163 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 ODF3Q96PU9 254 aa15.27■□□□□ 0.03
HPS3-206ENST00000486530 TCF21O43680 179 aa15.26■□□□□ 0.03
HPS3-206ENST00000486530 C18orf65Q6ZTR6 163 aa15.26■□□□□ 0.03
HPS3-206ENST00000486530 ANK3Q12955 4377 aaKnown RBP15.26■□□□□ 0.03
HPS3-206ENST00000486530 SYS1-DBNDD2H3BUS1 97 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 SLURP1P55000 103 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 ANXA2RQ3ZCQ2 193 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 LINC00173Q6ZV60 143 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 MAP1LC3CQ9BXW4 147 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 ACANP16112 2415 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 SONP18583 2426 aaKnown RBP15.25■□□□□ 0.03
HPS3-206ENST00000486530 S100A4P26447 101 aaKnown RBP15.25■□□□□ 0.03
HPS3-206ENST00000486530 DEFB136Q30KP8 78 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 MAP1LC3AQ9H492 121 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 ESM1Q9NQ30 184 aa15.25■□□□□ 0.03
HPS3-206ENST00000486530 C20orf202A1L168 122 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 EVI2AP22794 236 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 LEPP41159 167 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 KIR3DS1Q14943 382 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 SPATA45Q537H7 98 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 TCTEX1D4Q5JR98 221 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 DPF1Q92782 380 aa15.24■□□□□ 0.03
HPS3-206ENST00000486530 A0A0J9YX75 114 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 KHDC1LQ5JSQ8 128 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 OR11H1Q8NG94 326 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 MIEN1Q9BRT3 115 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 PEMTQ9UBM1 199 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 PET117Q6UWS5 81 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 SPATA12Q7Z6I5 190 aa15.23■□□□□ 0.03
HPS3-206ENST00000486530 TNFRSF6BO95407 300 aa15.22■□□□□ 0.03
HPS3-206ENST00000486530 ADAMTSL5Q6ZMM2 481 aa15.22■□□□□ 0.03
HPS3-206ENST00000486530 OR1N2Q8NGR9 330 aa15.22■□□□□ 0.03
HPS3-206ENST00000486530 SMR3AQ99954 134 aa15.22■□□□□ 0.03
HPS3-206ENST00000486530 SCRT2Q9NQ03 307 aa15.22■□□□□ 0.03
HPS3-206ENST00000486530 TMEM160Q9NX00 188 aa15.22■□□□□ 0.03
HPS3-206ENST00000486530 TIMM8BQ9Y5J9 83 aaPredicted RBP15.22■□□□□ 0.03
HPS3-206ENST00000486530 ATOH7Q8N100 152 aa15.21■□□□□ 0.03
HPS3-206ENST00000486530 KLHL30-AS1Q8NEE0 82 aa15.21■□□□□ 0.03
HPS3-206ENST00000486530 WFDC12Q8WWY7 111 aa15.21■□□□□ 0.03
HPS3-206ENST00000486530 MYO9AB2RTY4 2548 aa15.21■□□□□ 0.03
HPS3-206ENST00000486530 A0A096LNJ9 63 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 ZNF747Q9BV97 191 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 NXT2Q9NPJ8 142 aaKnown RBP15.2■□□□□ 0.02
HPS3-206ENST00000486530 PHLDA3Q9Y5J5 127 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 TRAV9-2A0A087WT02 112 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 C7orf71A4D174 169 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 LINC01546A6NGU7 62 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 DUSP14O95147 198 aaKnown RBP15.2■□□□□ 0.02
HPS3-206ENST00000486530 HBDP02042 147 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 SCGB2A2Q13296 93 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 ZNF705AQ6ZN79 300 aaPredicted RBP15.2■□□□□ 0.02
HPS3-206ENST00000486530 OR9G4Q8NGQ1 327 aa15.2■□□□□ 0.02
HPS3-206ENST00000486530 FAM159AQ6UWV7 190 aa15.19■□□□□ 0.02
HPS3-206ENST00000486530 FOXI2Q6ZQN5 318 aa15.19■□□□□ 0.02
HPS3-206ENST00000486530 OR4C46A6NHA9 309 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 M0R381 172 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 GAS8-AS1O95177 125 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 OR2K2Q8NGT1 345 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 MRAP2Q96G30 205 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 FLNBO75369 2602 aaKnown RBP15.18■□□□□ 0.02
HPS3-206ENST00000486530 TRAV2A0A0B4J234 112 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 GNRH2O43555 120 aa15.18■□□□□ 0.02
HPS3-206ENST00000486530 RNASE3P12724 160 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms