RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SPXQ9BT56 116 aa13.54□□□□□ -0.24
SNX5-213ENST00000486039 NDFIP1Q9BT67 221 aa13.54□□□□□ -0.24
SNX5-213ENST00000486039 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 HMSDA8MTL9 139 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 UBE2G2P60604 165 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 FLI1Q01543 452 aaPredicted RBP13.53□□□□□ -0.24
SNX5-213ENST00000486039 FHL2Q14192 279 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 TMEM75Q8N9X5 138 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 RASL10AQ92737 203 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
SNX5-213ENST00000486039 NBDYA0A0U1RRE5 68 aa13.52□□□□□ -0.25
SNX5-213ENST00000486039 PRNTQ86SH4 94 aa13.52□□□□□ -0.25
SNX5-213ENST00000486039 C11orf21Q9P2W6 132 aa13.52□□□□□ -0.25
SNX5-213ENST00000486039 MUC4Q99102 2169 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 MAP1LC3B2A6NCE7 125 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 FAM74A7A6NL05 159 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 PAX4O43316 350 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 GCGP01275 180 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 C1orf134Q5TEV5 83 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 MAP1LC3BQ9GZQ8 125 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 Q9H8V8 135 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 SDF2L1Q9HCN8 221 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 PRO0255Q9UI72 69 aa13.51□□□□□ -0.25
SNX5-213ENST00000486039 TRAV34A0A0B4J273 112 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 FHITP49789 147 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 CRYBA4P53673 196 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 ZNF479Q96JC4 524 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 KCNS1Q96KK3 526 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 HHLA3Q9XRX5 114 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 RYR1P21817 5038 aa13.5□□□□□ -0.25
SNX5-213ENST00000486039 FBLL1A6NHQ2 334 aaKnown RBP13.49□□□□□ -0.25
SNX5-213ENST00000486039 M0R2P5 195 aa13.49□□□□□ -0.25
SNX5-213ENST00000486039 IFNA7P01567 189 aa13.49□□□□□ -0.25
SNX5-213ENST00000486039 PFN1P07737 140 aaKnown RBP13.49□□□□□ -0.25
SNX5-213ENST00000486039 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
SNX5-213ENST00000486039 MRPS16Q9Y3D3 137 aaKnown RBP13.49□□□□□ -0.25
SNX5-213ENST00000486039 A0A0D9SG52 128 aa13.48□□□□□ -0.25
SNX5-213ENST00000486039 SEC11BP0C7V7 166 aa13.48□□□□□ -0.25
SNX5-213ENST00000486039 SLAQ13239 276 aa13.48□□□□□ -0.25
SNX5-213ENST00000486039 SOHLH1Q5JUK2 328 aa13.48□□□□□ -0.25
SNX5-213ENST00000486039 SAPCD1Q5SSQ6 148 aa13.48□□□□□ -0.25
SNX5-213ENST00000486039 NKX6-2Q9C056 277 aaPredicted RBP13.48□□□□□ -0.25
SNX5-213ENST00000486039 ARL2-SNX15V9GYD0 113 aa13.48□□□□□ -0.25
SNX5-213ENST00000486039 TRGV4A0A0C4DH28 118 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 PEX7O00628 323 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 BCL2L11O43521 198 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 ZFP69Q49AA0 526 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 Q6ZNX1 250 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 ZNF471Q9BX82 626 aaPredicted RBP13.47□□□□□ -0.25
SNX5-213ENST00000486039 ICOSQ9Y6W8 199 aa13.47□□□□□ -0.25
SNX5-213ENST00000486039 TRAV4A0A0B4J268 109 aa13.46□□□□□ -0.25
SNX5-213ENST00000486039 KANTRA0A1W2PQU2 76 aa13.46□□□□□ -0.25
SNX5-213ENST00000486039 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.25
SNX5-213ENST00000486039 KRTAP1-5Q9BYS1 174 aa13.46□□□□□ -0.25
SNX5-213ENST00000486039 C6orf223Q8N319 242 aa13.45□□□□□ -0.26
SNX5-213ENST00000486039 OR4C5Q8NGB2 326 aa13.45□□□□□ -0.26
SNX5-213ENST00000486039 STOML3Q8TAV4 291 aa13.45□□□□□ -0.26
SNX5-213ENST00000486039 PPT1P50897 306 aa13.44□□□□□ -0.26
SNX5-213ENST00000486039 TMUB2Q71RG4 321 aa13.44□□□□□ -0.26
SNX5-213ENST00000486039 Q86TA4 180 aa13.44□□□□□ -0.26
SNX5-213ENST00000486039 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
SNX5-213ENST00000486039 C9orf85Q96MD7 179 aa13.44□□□□□ -0.26
SNX5-213ENST00000486039 IGKV3D-20A0A0C4DH25 116 aa13.43□□□□□ -0.26
SNX5-213ENST00000486039 UMAD1C9J7I0 102 aa13.43□□□□□ -0.26
SNX5-213ENST00000486039 K7EQD1 137 aa13.43□□□□□ -0.26
SNX5-213ENST00000486039 MRPL23Q16540 153 aaKnown RBP13.43□□□□□ -0.26
SNX5-213ENST00000486039 FAM213BQ8TBF2 198 aa13.43□□□□□ -0.26
SNX5-213ENST00000486039 C9JCJ5 164 aa13.42□□□□□ -0.26
SNX5-213ENST00000486039 RNASE3P12724 160 aaKnown RBP13.42□□□□□ -0.26
SNX5-213ENST00000486039 ZNF876PQ49A33 203 aa13.42□□□□□ -0.26
SNX5-213ENST00000486039 CST9LP1Q5W188 147 aa13.42□□□□□ -0.26
SNX5-213ENST00000486039 LYPD5Q6UWN5 251 aa13.42□□□□□ -0.26
SNX5-213ENST00000486039 DPPA3Q6W0C5 159 aa13.42□□□□□ -0.26
SNX5-213ENST00000486039 SFT2D1Q8WV19 159 aa13.42□□□□□ -0.26
SNX5-213ENST00000486039 ABCA13Q86UQ4 5058 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 FABP5P3A8MUU1 101 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 PAGE4O60829 102 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 GYPEP15421 78 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 CRIP1P50238 77 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 TNP2Q05952 138 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 NEGR1Q7Z3B1 354 aa13.41□□□□□ -0.26
SNX5-213ENST00000486039 A0A1B0GV50 99 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 A0A1W2PPQ1 181 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 PGPEP1LA6NFU8 196 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 PFDN1O60925 122 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 EIF5AP63241 154 aaKnown RBP13.4□□□□□ -0.26
SNX5-213ENST00000486039 TTC32Q5I0X7 151 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 COX8CQ7Z4L0 72 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 ZC2HC1AQ96GY0 325 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 FMC1Q96HJ9 113 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 TCEAL7Q9BRU2 100 aa13.4□□□□□ -0.26
SNX5-213ENST00000486039 RS1O15537 224 aa13.39□□□□□ -0.27
SNX5-213ENST00000486039 NXPH4O95158 308 aa13.39□□□□□ -0.27
SNX5-213ENST00000486039 ORM1P02763 201 aa13.39□□□□□ -0.27
SNX5-213ENST00000486039 TPT1P13693 172 aaKnown RBP13.39□□□□□ -0.27
SNX5-213ENST00000486039 GATA1P15976 413 aaPredicted RBP13.39□□□□□ -0.27
SNX5-213ENST00000486039 SRIP30626 198 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms