RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 H0YJX3 145 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 J3KT08 172 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 FXYD1O00168 92 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 TCRAP04437 139 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 PCBD1P61457 104 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 RPS28P62857 69 aaKnown RBP0.23□□□□□ -2.37
GCFC2-209ENST00000486016 IQCJQ1A5X6 159 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 Q5XG85 94 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 OR4S1Q8NGB4 309 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 TSKUQ8WUA8 353 aa0.23□□□□□ -2.37
GCFC2-209ENST00000486016 TRPM7Q96QT4 1865 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 PNMA8CA0A1B0GUJ8 204 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 GNG14A0A1W2PPG7 69 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 DPM2O94777 84 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 NBEAP1P0C6P0 100 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 ADCYAP1P18509 176 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 PSPHP78330 225 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 HSD17B12Q53GQ0 312 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 OR8I2Q8N0Y5 310 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 ATG5Q9H1Y0 275 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 GINS2Q9Y248 185 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 HSPB11Q9Y547 144 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 WDR97A6NE52 1622 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 ZCCHC6Q5VYS8 1495 aaKnown RBP0.22□□□□□ -2.37
GCFC2-209ENST00000486016 FRAS1Q86XX4 4008 aa0.22□□□□□ -2.37
GCFC2-209ENST00000486016 PTPRGP23470 1445 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 ATG2AQ2TAZ0 1938 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 TRAV36DV7A0A075B6V5 113 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 MT-ND4LP03901 98 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 HIST1H1BP16401 226 aaKnown RBP0.21□□□□□ -2.38
GCFC2-209ENST00000486016 SDC4P31431 198 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 B2MP61769 119 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 OR8B8Q15620 311 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 METTL1Q9UBP6 276 aaKnown RBP0.21□□□□□ -2.38
GCFC2-209ENST00000486016 NINQ8N4C6 2090 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 CACNA1EQ15878 2313 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 CDK12Q9NYV4 1490 aaPredicted RBP0.21□□□□□ -2.38
GCFC2-209ENST00000486016 ARHGAP31Q2M1Z3 1444 aa0.21□□□□□ -2.38
GCFC2-209ENST00000486016 CPDO75976 1380 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 A0A1B0GX51 115 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 CCKP06307 115 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 PAEPP09466 180 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 POLR2JP52435 117 aaKnown RBP0.2□□□□□ -2.38
GCFC2-209ENST00000486016 KLKP1Q107X0 134 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 UNQ5815/PRO19632Q6UWF5 114 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 MRPL40Q9NQ50 206 aaKnown RBP0.2□□□□□ -2.38
GCFC2-209ENST00000486016 MYH1P12882 1939 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 LRP5O75197 1615 aa0.2□□□□□ -2.38
GCFC2-209ENST00000486016 TNCP24821 2201 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 KIDINS220Q9ULH0 1771 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 TRAV17A0A0B4J275 112 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 TRBV10-1A0A0K0K1A3 114 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 A0A1B0GW64 132 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 CD3DP04234 171 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 PLGLB1Q02325 96 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 TMEM244Q5VVB8 128 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 TMEM91Q6ZNR0 172 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 SLC35B3Q9H1N7 401 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 TMEM14BQ9NUH8 114 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 CALML5Q9NZT1 146 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 XIRP1Q702N8 1843 aaKnown RBP0.19□□□□□ -2.38
GCFC2-209ENST00000486016 MEGF8Q7Z7M0 2845 aa0.19□□□□□ -2.38
GCFC2-209ENST00000486016 AFDNP55196 1824 aaKnown RBP0.18□□□□□ -2.38
GCFC2-209ENST00000486016 ARAP1Q96P48 1450 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 DEGS1O15121 323 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 TNFSF15O95150 251 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 SCTP09683 121 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 CMPK1P30085 196 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 SPINK6Q6UWN8 80 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 TAC4Q86UU9 113 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 TCTE3Q8IZS6 198 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 BANF2Q9H503 90 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 DNAJC15Q9Y5T4 150 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 BLMP54132 1417 aaPredicted RBP0.18□□□□□ -2.38
GCFC2-209ENST00000486016 KDM5CP41229 1560 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 RREB1Q92766 1687 aa0.18□□□□□ -2.38
GCFC2-209ENST00000486016 DLEC1Q9Y238 1755 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 A0A096LNT2 108 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 C9JAW5 83 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 SMIM24O75264 130 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 OR2H2O95918 312 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 TFF1P04155 84 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 MPC1LP0DKB6 136 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 AKR1D1P51857 326 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 SLC25A26Q70HW3 274 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 HIGD1AQ9Y241 93 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 ESPL1Q14674 2120 aa0.17□□□□□ -2.38
GCFC2-209ENST00000486016 HELZP42694 1942 aaKnown RBP0.17□□□□□ -2.38
GCFC2-209ENST00000486016 CXorf51AA0A1B0GTR3 108 aa0.16□□□□□ -2.38
GCFC2-209ENST00000486016 HLA-DRB4P13762 266 aa0.16□□□□□ -2.38
GCFC2-209ENST00000486016 CCDC153Q494R4 210 aa0.16□□□□□ -2.38
GCFC2-209ENST00000486016 PPDPFLQ8WWR9 84 aa0.16□□□□□ -2.38
GCFC2-209ENST00000486016 TAS2R8Q9NYW2 309 aa0.16□□□□□ -2.38
GCFC2-209ENST00000486016 HLA-DRB4X5D2U9 266 aa0.16□□□□□ -2.38
GCFC2-209ENST00000486016 RBBP6Q7Z6E9 1792 aaKnown RBP0.16□□□□□ -2.38
GCFC2-209ENST00000486016 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
GCFC2-209ENST00000486016 TEX49A0A1B0GTD5 131 aa0.15□□□□□ -2.39
GCFC2-209ENST00000486016 SNX29P2Q8IUI4 249 aa0.15□□□□□ -2.39
GCFC2-209ENST00000486016 ATP6V0E2Q8NHE4 81 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms