RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TRAV21A0A0B4J279 112 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 HMSDA8MTL9 139 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 K7EQM0 130 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 CIDEAO60543 219 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 NUDT3O95989 172 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 ARL14EPLP0DKL9 152 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 GCHFRP30047 84 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 SUMO1P63165 101 aaKnown RBP4.86□□□□□ -1.63
VPS50-218ENST00000485994 SOHLH1Q5JUK2 328 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 RPL7L1Q6DKI1 246 aaKnown RBP4.86□□□□□ -1.63
VPS50-218ENST00000485994 FAM159AQ6UWV7 190 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 Q6ZQT7 251 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 C5orf17Q8NAS9 161 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 PTH2Q96A98 100 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 TVP23CQ96ET8 276 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 VSIG2Q96IQ7 327 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 KCNS1Q96KK3 526 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 PRO0255Q9UI72 69 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 EPDR1Q9UM22 224 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 PKD1P98161 4303 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 PKHD1P08F94 4074 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 A0A096LPF7 62 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 TRGV1A0A0A0MS02 117 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 CTXND1A0A1B0GTU2 59 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 A0A1W2PPQ1 181 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 M0R2N4 97 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 IGLV2-11P01706 119 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 TCRAP04437 139 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 ZNF415Q09FC8 603 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 FHL2Q14192 279 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 ZNF345Q14585 488 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 ESRGQ1W209 222 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 LGALSLQ3ZCW2 172 aaPredicted RBP4.85□□□□□ -1.63
VPS50-218ENST00000485994 SAPCD1Q5SSQ6 148 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 C1orf134Q5TEV5 83 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 GOLT1AQ6ZVE7 132 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 SSX7Q7RTT5 188 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 COX8CQ7Z4L0 72 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 KCNRGQ8N5I3 272 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 TMEM75Q8N9X5 138 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 Q8TAT8 98 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 HYLS1Q96M11 299 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 ARPC5LQ9BPX5 153 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 TMPRSS5Q9H3S3 457 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 Q9H8V8 135 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 TREM1Q9NP99 234 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 MDFICQ9P1T7 246 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 HHLA3Q9XRX5 114 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 DNAH11Q96DT5 4516 aa4.85□□□□□ -1.63
VPS50-218ENST00000485994 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.63
VPS50-218ENST00000485994 PRSS29PA6NIE9 313 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 K7EP13 123 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 EREGO14944 169 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 HMGB3O15347 200 aaKnown RBP4.84□□□□□ -1.63
VPS50-218ENST00000485994 ARPC5O15511 151 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 C1QBP02746 253 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 SEC11BP0C7V7 166 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 FHITP49789 147 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 CRYBA4P53673 196 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 ZNF726P1Q15940 193 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 PIK3CD-AS1Q5SR53 167 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 NDFIP1Q9BT67 221 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 SH3BGRL3Q9H299 93 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 PSG8Q9UQ74 426 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 MRPS16Q9Y3D3 137 aaKnown RBP4.84□□□□□ -1.63
VPS50-218ENST00000485994 ARL2-SNX15V9GYD0 113 aa4.84□□□□□ -1.63
VPS50-218ENST00000485994 HERC2O95714 4834 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 IGLV2-18A0A075B6J9 118 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TRAV4A0A0B4J268 109 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 IGHV3-16A0A0C4DH30 117 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 A0A0D9SG52 128 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 A0A0J9YY99 117 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 GGTLC3B5MD39 225 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 M0R2P5 195 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 GNRH2O43555 120 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 EIF3GO75821 320 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS50-218ENST00000485994 PFN1P07737 140 aaKnown RBP4.83□□□□□ -1.64
VPS50-218ENST00000485994 FLI1Q01543 452 aaPredicted RBP4.83□□□□□ -1.64
VPS50-218ENST00000485994 MRPL23Q16540 153 aaKnown RBP4.83□□□□□ -1.64
VPS50-218ENST00000485994 TMEM183BQ1AE95 376 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 SMUG1Q53HV7 270 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TTC32Q5I0X7 151 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 MUC21Q5SSG8 566 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 AKR1C8PQ5T2L2 129 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TMUB2Q71RG4 321 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 AKAP14Q86UN6 197 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TMEM183AQ8IXX5 376 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 C6orf223Q8N319 242 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 CYB561D1Q8N8Q1 229 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 MBD3L1Q8WWY6 194 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 HIST1H2BAQ96A08 127 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TCEAL7Q9BRU2 100 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 ICOSQ9Y6W8 199 aa4.83□□□□□ -1.64
VPS50-218ENST00000485994 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 FAM74A7A6NL05 159 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 FABP5P3A8MUU1 101 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 UMAD1C9J7I0 102 aa4.82□□□□□ -1.64
VPS50-218ENST00000485994 F6UZH7 168 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms