RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 TYMSP04818 313 aa14.22□□□□□ -0.13
LMBR1-217ENST00000485985 Q5BKY6 102 aa14.22□□□□□ -0.13
LMBR1-217ENST00000485985 NEGR1Q7Z3B1 354 aa14.22□□□□□ -0.13
LMBR1-217ENST00000485985 SGK494Q96LW2 274 aa14.22□□□□□ -0.13
LMBR1-217ENST00000485985 TRAV21A0A0B4J279 112 aa14.21□□□□□ -0.13
LMBR1-217ENST00000485985 ATP6V0CP27449 155 aa14.21□□□□□ -0.13
LMBR1-217ENST00000485985 RAB24Q969Q5 203 aa14.21□□□□□ -0.13
LMBR1-217ENST00000485985 PSMG3Q9BT73 122 aaPredicted RBP14.21□□□□□ -0.13
LMBR1-217ENST00000485985 SH3BGRL3Q9H299 93 aa14.21□□□□□ -0.13
LMBR1-217ENST00000485985 TRAV4A0A0B4J268 109 aa14.2□□□□□ -0.14
LMBR1-217ENST00000485985 GYPEP15421 78 aa14.2□□□□□ -0.14
LMBR1-217ENST00000485985 GCHFRP30047 84 aa14.2□□□□□ -0.14
LMBR1-217ENST00000485985 SUN5Q8TC36 379 aa14.2□□□□□ -0.14
LMBR1-217ENST00000485985 MED28Q9H204 178 aa14.2□□□□□ -0.14
LMBR1-217ENST00000485985 TNFRSF18Q9Y5U5 241 aa14.2□□□□□ -0.14
LMBR1-217ENST00000485985 M0R2P5 195 aa14.19□□□□□ -0.14
LMBR1-217ENST00000485985 TCRAP04437 139 aa14.19□□□□□ -0.14
LMBR1-217ENST00000485985 SRIP30626 198 aa14.19□□□□□ -0.14
LMBR1-217ENST00000485985 WFDC10BQ8IUB3 73 aa14.19□□□□□ -0.14
LMBR1-217ENST00000485985 C5orf17Q8NAS9 161 aa14.19□□□□□ -0.14
LMBR1-217ENST00000485985 SDF2L1Q9HCN8 221 aa14.19□□□□□ -0.14
LMBR1-217ENST00000485985 LOC100131303A0A0U1RQF7 123 aa14.18□□□□□ -0.14
LMBR1-217ENST00000485985 EPM2AB3EWF7 344 aa14.18□□□□□ -0.14
LMBR1-217ENST00000485985 GGTLC3B5MD39 225 aa14.18□□□□□ -0.14
LMBR1-217ENST00000485985 ZNF80P51504 273 aaPredicted RBP14.18□□□□□ -0.14
LMBR1-217ENST00000485985 PCNPQ8WW12 178 aaKnown RBP14.18□□□□□ -0.14
LMBR1-217ENST00000485985 C11orf21Q9P2W6 132 aa14.18□□□□□ -0.14
LMBR1-217ENST00000485985 IGLV2-11P01706 119 aa14.17□□□□□ -0.14
LMBR1-217ENST00000485985 OR4C5Q8NGB2 326 aa14.17□□□□□ -0.14
LMBR1-217ENST00000485985 SERTM2A0A1B0GWG4 89 aa14.16□□□□□ -0.14
LMBR1-217ENST00000485985 RNF222A6NCQ9 220 aa14.16□□□□□ -0.14
LMBR1-217ENST00000485985 C9JCJ5 164 aa14.16□□□□□ -0.14
LMBR1-217ENST00000485985 ORM1P02763 201 aa14.16□□□□□ -0.14
LMBR1-217ENST00000485985 ASB13Q8WXK3 278 aa14.16□□□□□ -0.14
LMBR1-217ENST00000485985 KCNS1Q96KK3 526 aa14.16□□□□□ -0.14
LMBR1-217ENST00000485985 GIPP09681 153 aaPredicted RBP14.15□□□□□ -0.14
LMBR1-217ENST00000485985 SERF2P84101 59 aa14.15□□□□□ -0.14
LMBR1-217ENST00000485985 TMEM75Q8N9X5 138 aa14.15□□□□□ -0.14
LMBR1-217ENST00000485985 NDFIP1Q9BT67 221 aa14.15□□□□□ -0.14
LMBR1-217ENST00000485985 PGPEP1Q9NXJ5 209 aa14.15□□□□□ -0.14
LMBR1-217ENST00000485985 LY96Q9Y6Y9 160 aa14.15□□□□□ -0.14
LMBR1-217ENST00000485985 DMBT1Q9UGM3 2413 aaPredicted RBP14.14□□□□□ -0.15
LMBR1-217ENST00000485985 FUSP35637 526 aaKnown RBP eCLIP14.14□□□□□ -0.15
LMBR1-217ENST00000485985 RPL7L1Q6DKI1 246 aaKnown RBP14.14□□□□□ -0.15
LMBR1-217ENST00000485985 PSG8Q9UQ74 426 aa14.14□□□□□ -0.15
LMBR1-217ENST00000485985 HERC1Q15751 4861 aa14.14□□□□□ -0.15
LMBR1-217ENST00000485985 CXorf1O96002 111 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 GCGP01275 180 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 MBP02144 154 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 GATA1P15976 413 aaPredicted RBP14.13□□□□□ -0.15
LMBR1-217ENST00000485985 SUMO1P63165 101 aaKnown RBP14.13□□□□□ -0.15
LMBR1-217ENST00000485985 DPPA3Q6W0C5 159 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 TXNDC17Q9BRA2 123 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 TMEM167BQ9NRX6 74 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 EPDR1Q9UM22 224 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 TNFSF18Q9UNG2 199 aa14.13□□□□□ -0.15
LMBR1-217ENST00000485985 DNAH10OSP0CZ25 163 aa14.12□□□□□ -0.15
LMBR1-217ENST00000485985 FLI1Q01543 452 aaPredicted RBP14.12□□□□□ -0.15
LMBR1-217ENST00000485985 ZNF726P1Q15940 193 aa14.12□□□□□ -0.15
LMBR1-217ENST00000485985 CYB561D1Q8N8Q1 229 aa14.12□□□□□ -0.15
LMBR1-217ENST00000485985 C9orf85Q96MD7 179 aa14.12□□□□□ -0.15
LMBR1-217ENST00000485985 ACTR3CQ9C0K3 210 aaPredicted RBP14.12□□□□□ -0.15
LMBR1-217ENST00000485985 FXYD6-FXYD2A0A087WZ82 144 aa14.11□□□□□ -0.15
LMBR1-217ENST00000485985 K7EQM0 130 aa14.11□□□□□ -0.15
LMBR1-217ENST00000485985 PFN1P07737 140 aaKnown RBP14.11□□□□□ -0.15
LMBR1-217ENST00000485985 INAFM2P0DMQ5 153 aa14.11□□□□□ -0.15
LMBR1-217ENST00000485985 ERVFC1-1P60608 527 aa14.11□□□□□ -0.15
LMBR1-217ENST00000485985 ZNF876PQ49A33 203 aa14.11□□□□□ -0.15
LMBR1-217ENST00000485985 PRNTQ86SH4 94 aa14.11□□□□□ -0.15
LMBR1-217ENST00000485985 FBLL1A6NHQ2 334 aaKnown RBP14.1□□□□□ -0.15
LMBR1-217ENST00000485985 TAAR5O14804 337 aa14.1□□□□□ -0.15
LMBR1-217ENST00000485985 EREGO14944 169 aa14.1□□□□□ -0.15
LMBR1-217ENST00000485985 XGP55808 180 aa14.1□□□□□ -0.15
LMBR1-217ENST00000485985 CFAP126Q5VTH2 177 aa14.1□□□□□ -0.15
LMBR1-217ENST00000485985 NFE4Q86UQ8 179 aa14.1□□□□□ -0.15
LMBR1-217ENST00000485985 INO80EQ8NBZ0 244 aaPredicted RBP14.1□□□□□ -0.15
LMBR1-217ENST00000485985 MSRB1Q9NZV6 116 aa14.1□□□□□ -0.15
LMBR1-217ENST00000485985 G3V3Q6 166 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 RNASE3P12724 160 aaKnown RBP14.09□□□□□ -0.15
LMBR1-217ENST00000485985 ZFP69Q49AA0 526 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 SMUG1Q53HV7 270 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 CDPF1Q6NVV7 123 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 SLC25A29Q8N8R3 303 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 NHLRC2Q8NBF2 726 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 LINC00479Q96M42 142 aa14.09□□□□□ -0.15
LMBR1-217ENST00000485985 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
LMBR1-217ENST00000485985 A0A1W2PRE2 83 aa14.08□□□□□ -0.16
LMBR1-217ENST00000485985 PGPEP1LA6NFU8 196 aa14.08□□□□□ -0.16
LMBR1-217ENST00000485985 RS1O15537 224 aa14.08□□□□□ -0.16
LMBR1-217ENST00000485985 EVI2AP22794 236 aa14.08□□□□□ -0.16
LMBR1-217ENST00000485985 ZNF506Q5JVG8 444 aa14.08□□□□□ -0.16
LMBR1-217ENST00000485985 A0A087WTM6 91 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 BORCS7-ASMTA0A0B4J1R7 106 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 IGHV3-73A0A0B4J1V6 119 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 TRAV34A0A0B4J273 112 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 CTXND1A0A1B0GTU2 59 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 K7EP13 123 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 TIRAPP58753 221 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 OR2T35Q8NGX2 323 aa14.07□□□□□ -0.16
LMBR1-217ENST00000485985 ARL2-SNX15V9GYD0 113 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms