RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 MUC21Q5SSG8 566 aa8.46□□□□□ -1.06
HLA-DOA-204ENST00000485901 C9orf62Q8N4C0 152 aa8.46□□□□□ -1.06
HLA-DOA-204ENST00000485901 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
HLA-DOA-204ENST00000485901 LINC00479Q96M42 142 aa8.46□□□□□ -1.06
HLA-DOA-204ENST00000485901 TP53TG3Q9ULZ0 132 aa8.46□□□□□ -1.06
HLA-DOA-204ENST00000485901 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 TRAV34A0A0B4J273 112 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 A0A1B0GV50 99 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 GAGE12BA1L429 117 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 F5H768 121 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 GAGE7O76087 117 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 GAGE12FP0CL80 117 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 GAGE12GP0CL81 117 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 GAGE12IP0CL82 117 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 SULT1A2P50226 295 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 TDRG1Q3Y452 100 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 SMUG1Q53HV7 270 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 NAGKQ9UJ70 344 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 KLF12Q9Y4X4 402 aa8.45□□□□□ -1.06
HLA-DOA-204ENST00000485901 TRGV1A0A0A0MS02 117 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 TRAV1-1A0A0B4J248 108 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 SPINK4O60575 86 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 GCGP01275 180 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 ZNF415Q09FC8 603 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 ZFP30Q9Y2G7 519 aa8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 DYNC1H1Q14204 4646 aaKnown RBP8.44□□□□□ -1.06
HLA-DOA-204ENST00000485901 TRGV2A0A075B6R0 118 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 GNRH2O43555 120 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 S100A9P06702 114 aaKnown RBP8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 PFN1P07737 140 aaKnown RBP8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 UBE2G1P62253 170 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 TMEM183BQ1AE95 376 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 SOHLH1Q5JUK2 328 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 TMEM88Q6PEY1 159 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 Q6ZTI0 123 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 FMC1Q96HJ9 113 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 SPXQ9BT56 116 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 SDF2L1Q9HCN8 221 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 MDFICQ9P1T7 246 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 PKD1P98161 4303 aa8.43□□□□□ -1.06
HLA-DOA-204ENST00000485901 TRBV6-1A0A0K0K1D8 114 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 FABP5P3A8MUU1 101 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 AKR1C3P42330 323 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 ZNF80P51504 273 aaPredicted RBP8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 CCL20P78556 96 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 OR5I1Q13606 314 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 GNG13Q9P2W3 67 aa8.42□□□□□ -1.06
HLA-DOA-204ENST00000485901 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
HLA-DOA-204ENST00000485901 RTL8CO15255 209 aa8.41□□□□□ -1.06
HLA-DOA-204ENST00000485901 RNF212Q495C1 297 aa8.41□□□□□ -1.06
HLA-DOA-204ENST00000485901 Q86TA4 180 aa8.41□□□□□ -1.06
HLA-DOA-204ENST00000485901 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
HLA-DOA-204ENST00000485901 TYMSP04818 313 aa8.4□□□□□ -1.06
HLA-DOA-204ENST00000485901 FAM3BP58499 235 aaPredicted RBP8.4□□□□□ -1.06
HLA-DOA-204ENST00000485901 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
HLA-DOA-204ENST00000485901 RASL10AQ92737 203 aa8.4□□□□□ -1.06
HLA-DOA-204ENST00000485901 MRPL16Q9NX20 251 aaKnown RBP8.4□□□□□ -1.06
HLA-DOA-204ENST00000485901 SCO2A0A1W2PP80 73 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 M0R2P5 195 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 LTAP01374 205 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 IFNA1P01562 189 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 BLOC1S1P78537 153 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 Q6ZR54 194 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 C11orf21Q9P2W6 132 aa8.39□□□□□ -1.07
HLA-DOA-204ENST00000485901 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 H3BNG1 76 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 NUDT3O95989 172 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 HOXA5P20719 270 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 SLAQ13239 276 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
HLA-DOA-204ENST00000485901 ORM1P02763 201 aa8.37□□□□□ -1.07
HLA-DOA-204ENST00000485901 CRIP1P50238 77 aa8.37□□□□□ -1.07
HLA-DOA-204ENST00000485901 UBE2DNLQ8IWF7 75 aa8.37□□□□□ -1.07
HLA-DOA-204ENST00000485901 ZC2HC1AQ96GY0 325 aa8.37□□□□□ -1.07
HLA-DOA-204ENST00000485901 VAX2Q9UIW0 290 aa8.37□□□□□ -1.07
HLA-DOA-204ENST00000485901 BOLA1Q9Y3E2 137 aa8.37□□□□□ -1.07
HLA-DOA-204ENST00000485901 IGKV3D-20A0A0C4DH25 116 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 A0A0J9YY99 117 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 B4DEV8 164 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 PDE6DO43924 150 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 IGHV3-53P01767 116 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 S100A4P26447 101 aaKnown RBP8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 MEF2BQ02080 365 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 NACAE9PAV3 2078 aa8.36□□□□□ -1.07
HLA-DOA-204ENST00000485901 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 SH2D1AO60880 128 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 CDK2AP2O75956 126 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms