RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 TRBV20OR9-2A0A075B6H5 130 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 ZNF705GA8MUZ8 300 aaPredicted RBP6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 C9JCJ5 164 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 GCGP01275 180 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 AZU1P20160 251 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 ZNF674Q2M3X9 581 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 IBA57Q5T440 356 aaKnown RBP6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 C16orf74Q96GX8 76 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 ZC2HC1AQ96GY0 325 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 SMDT1Q9H4I9 107 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 TP53TG3Q9ULZ0 132 aa6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 CARHSP1Q9Y2V2 147 aaKnown RBP6.67□□□□□ -1.34
SHROOM3-207ENST00000485780 TEX48A0A1B0GUV7 120 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 PRM2P04554 102 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 CRIP1P50238 77 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
SHROOM3-207ENST00000485780 NUPR2A6NF83 97 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 LYRM9A8MSI8 78 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 DEFB4AO15263 64 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 TCL1AP56279 114 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 DAZ2Q13117 558 aaKnown RBP6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 CENPWQ5EE01 88 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 FAM162BQ5T6X4 162 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 BAGE2Q86Y30 109 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 KCNS1Q96KK3 526 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 EIF5A2Q9GZV4 153 aaKnown RBP6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 PARLQ9H300 379 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 CELA1Q9UNI1 258 aa6.65□□□□□ -1.34
SHROOM3-207ENST00000485780 HYDINQ4G0P3 5121 aa6.65□□□□□ -1.35
SHROOM3-207ENST00000485780 FABP5P3A8MUU1 101 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 C9JQL5 133 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 SCO1O75880 301 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 TYMSP04818 313 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 ADCYAP1P18509 176 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 LINC01559Q495D7 138 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 DNLZQ5SXM8 178 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 FAM222AQ5U5X8 452 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 FAM159AQ6UWV7 190 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 SEC11CQ9BY50 192 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 KLK5Q9Y337 293 aaPredicted RBP6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 TIMM8BQ9Y5J9 83 aaPredicted RBP6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 MUC4Q99102 2169 aa6.64□□□□□ -1.35
SHROOM3-207ENST00000485780 TRGV11A0A075B6L2 103 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 IGKV3D-20A0A0C4DH25 116 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 CBY3A6NI87 242 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 SH2D1AO60880 128 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 CXCL1P09341 107 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 SPART-AS1P0CW21 52 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 GNG4P50150 75 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 C12orf74Q32Q52 190 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 MUC21Q5SSG8 566 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 ATRAIDQ6UW56 229 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 C11orf45Q8TAV5 145 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 C18orf15Q96N68 181 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 SDF2L1Q9HCN8 221 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 LY96Q9Y6Y9 160 aa6.63□□□□□ -1.35
SHROOM3-207ENST00000485780 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 C19orf71A6NCJ1 209 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 SNURFLB1AK76 121 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 APOC3P02656 99 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 HTN1P15515 57 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 ZNF415Q09FC8 603 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 PEA15Q15121 130 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 LGALS9BQ3B8N2 356 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 CEMP1Q6PRD7 247 aaPredicted RBP6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 SVBPQ8N300 66 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 C9orf85Q96MD7 179 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 SPXQ9BT56 116 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 BIN3Q9NQY0 253 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 GSN-AS1Q9NRJ2 163 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 MDFICQ9P1T7 246 aa6.62□□□□□ -1.35
SHROOM3-207ENST00000485780 PGPEP1LA6NFU8 196 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 K7EN84 100 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 GNRH2O43555 120 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 SPINK4O60575 86 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 LY6G6CO95867 125 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 RNASE3P12724 160 aaKnown RBP6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 EMP1P54849 157 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 NANOS2P60321 138 aaKnown RBP6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 FAM74A3Q4VXF1 159 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 PHLDA1Q8WV24 401 aaPredicted RBP6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 PTH2Q96A98 100 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 SMIM7Q9BQ49 75 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 NOP10Q9NPE3 64 aaKnown RBP6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 NAGKQ9UJ70 344 aa6.61□□□□□ -1.35
SHROOM3-207ENST00000485780 B4DEV8 164 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 F8W036 122 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 MED14OSP0DP75 135 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 PIK3CD-AS1Q5SR53 167 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 Q6ZTC4 211 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms