RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 K7EQD1 137 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 EIF3GO75821 320 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMC4-216ENST00000485645 ATP6V0CP27449 155 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 ERVFC1-1P60608 527 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 NFE4Q86UQ8 179 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 LY96Q9Y6Y9 160 aa11.69□□□□□ -0.54
SMC4-216ENST00000485645 ORM1P02763 201 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 GYPEP15421 78 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 SERF2P84101 59 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 TDRG1Q3Y452 100 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 RPL7L1Q6DKI1 246 aaKnown RBP11.68□□□□□ -0.54
SMC4-216ENST00000485645 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 TNFRSF18Q9Y5U5 241 aa11.68□□□□□ -0.54
SMC4-216ENST00000485645 BORCS7-ASMTA0A0B4J1R7 106 aa11.67□□□□□ -0.54
SMC4-216ENST00000485645 TRAV4A0A0B4J268 109 aa11.67□□□□□ -0.54
SMC4-216ENST00000485645 TRAV21A0A0B4J279 112 aa11.67□□□□□ -0.54
SMC4-216ENST00000485645 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
SMC4-216ENST00000485645 ARL6IP6Q8N6S5 226 aa11.67□□□□□ -0.54
SMC4-216ENST00000485645 C9JCJ5 164 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 K7EP13 123 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 M0R2P5 195 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 ARPC5O15511 151 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 GNRH2O43555 120 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 MBP02144 154 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 OR4C5Q8NGB2 326 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 TXNDC17Q9BRA2 123 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 TREM1Q9NP99 234 aa11.66□□□□□ -0.54
SMC4-216ENST00000485645 IGHV3-16A0A0C4DH30 117 aa11.65□□□□□ -0.54
SMC4-216ENST00000485645 SMLR1H3BR10 107 aa11.65□□□□□ -0.54
SMC4-216ENST00000485645 TAAR5O14804 337 aa11.65□□□□□ -0.54
SMC4-216ENST00000485645 EVI2AP22794 236 aa11.65□□□□□ -0.54
SMC4-216ENST00000485645 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
SMC4-216ENST00000485645 WFDC10BQ8IUB3 73 aa11.65□□□□□ -0.54
SMC4-216ENST00000485645 TRAV8-1A0A0A6YYK1 113 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 F6UZH7 168 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 HMGB3O15347 200 aaKnown RBP11.64□□□□□ -0.55
SMC4-216ENST00000485645 CDPF1Q6NVV7 123 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 RAB24Q969Q5 203 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 TVP23CQ96ET8 276 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 KCNS1Q96KK3 526 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 SDF2L1Q9HCN8 221 aa11.64□□□□□ -0.55
SMC4-216ENST00000485645 TYMSP04818 313 aa11.63□□□□□ -0.55
SMC4-216ENST00000485645 STAG3L2P0CL84 134 aa11.63□□□□□ -0.55
SMC4-216ENST00000485645 STAG3L3P0CL85 134 aa11.63□□□□□ -0.55
SMC4-216ENST00000485645 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
SMC4-216ENST00000485645 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMC4-216ENST00000485645 GNG5P63218 68 aa11.63□□□□□ -0.55
SMC4-216ENST00000485645 MSRB1Q9NZV6 116 aa11.63□□□□□ -0.55
SMC4-216ENST00000485645 A0A087WTM6 91 aa11.62□□□□□ -0.55
SMC4-216ENST00000485645 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
SMC4-216ENST00000485645 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
SMC4-216ENST00000485645 SH2D6Q7Z4S9 175 aa11.62□□□□□ -0.55
SMC4-216ENST00000485645 NDFIP1Q9BT67 221 aa11.62□□□□□ -0.55
SMC4-216ENST00000485645 ACTR3CQ9C0K3 210 aaPredicted RBP11.62□□□□□ -0.55
SMC4-216ENST00000485645 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
SMC4-216ENST00000485645 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 SERTM2A0A1B0GWG4 89 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 ZNF345Q14585 488 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 KCNRGQ8N5I3 272 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 NHLRC2Q8NBF2 726 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 OR11H4Q8NGC9 324 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 SUN5Q8TC36 379 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
SMC4-216ENST00000485645 CRYGDP07320 174 aa11.6□□□□□ -0.55
SMC4-216ENST00000485645 GATA1P15976 413 aaPredicted RBP11.6□□□□□ -0.55
SMC4-216ENST00000485645 GCHFRP30047 84 aa11.6□□□□□ -0.55
SMC4-216ENST00000485645 K7EQM0 130 aa11.59□□□□□ -0.55
SMC4-216ENST00000485645 CXorf1O96002 111 aa11.59□□□□□ -0.55
SMC4-216ENST00000485645 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
SMC4-216ENST00000485645 A0A0D9SG52 128 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 FBLL1A6NHQ2 334 aaKnown RBP11.58□□□□□ -0.56
SMC4-216ENST00000485645 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 TCRAP04437 139 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 PPT1P50897 306 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 TIRAPP58753 221 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 ZNF876PQ49A33 203 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 AKR1C8PQ5T2L2 129 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
SMC4-216ENST00000485645 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
SMC4-216ENST00000485645 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
SMC4-216ENST00000485645 CIDEAO60543 219 aa11.57□□□□□ -0.56
SMC4-216ENST00000485645 PFN1P07737 140 aaKnown RBP11.57□□□□□ -0.56
SMC4-216ENST00000485645 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
SMC4-216ENST00000485645 Q6ZNX1 250 aa11.57□□□□□ -0.56
SMC4-216ENST00000485645 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
SMC4-216ENST00000485645 RS1O15537 224 aa11.56□□□□□ -0.56
SMC4-216ENST00000485645 GCGP01275 180 aa11.56□□□□□ -0.56
SMC4-216ENST00000485645 ZNF80P51504 273 aaPredicted RBP11.56□□□□□ -0.56
SMC4-216ENST00000485645 XGP55808 180 aa11.56□□□□□ -0.56
SMC4-216ENST00000485645 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
SMC4-216ENST00000485645 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
SMC4-216ENST00000485645 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
SMC4-216ENST00000485645 PRADC1Q9BSG0 188 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms