RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 RHOHQ15669 191 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 ATRAIDQ6UW56 229 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 NIT1Q86X76 327 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 BPIFA4PQ86YQ2 179 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 ZFAND2AQ8N6M9 145 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 LYPD6BQ8NI32 183 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 ZFAND1Q8TCF1 268 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 SPACA4Q8TDM5 124 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 GPX8Q8TED1 209 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 SPXQ9BT56 116 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 SRRQ9GZT4 340 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 NAA60Q9H7X0 242 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 C8orf4Q9NR00 106 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 PXMP4Q9Y6I8 212 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 TRBV6-4A0A1B0GX49 114 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 C5orf51A6NDU8 294 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 PRSS46E5RG02 174 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 M0R2P5 195 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF253O75346 499 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 SEC11BP0C7V7 166 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 IGLC2P0DOY2 106 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 CRISP2P16562 243 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 CCR6P51684 374 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 UBE2MP61081 183 aaKnown RBP3.27□□□□□ -1.89
PTPN4-210ENST00000485247 GAGE5Q13069 117 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 RAB31Q13636 194 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 SMCO1Q147U7 214 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 RNASE10Q5GAN6 216 aaKnown RBP3.27□□□□□ -1.89
PTPN4-210ENST00000485247 UBE2NLQ5JXB2 153 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 LINC00305Q7Z4B0 112 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 S100A7AQ86SG5 101 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 SNX29P2Q8IUI4 249 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 OR52I2Q8NH67 350 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 MARCH1Q8TCQ1 289 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 SH3BGRL3Q9H299 93 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 PLAC8Q9NZF1 115 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 RNF24Q9Y225 148 aa3.27□□□□□ -1.89
PTPN4-210ENST00000485247 IGHV3-64A0A075B6Q5 118 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 IGKV2-40A0A087WW87 121 aaPredicted RBP3.26□□□□□ -1.89
PTPN4-210ENST00000485247 A0A087WX48 190 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 MUC21A0A0G2JKD1 596 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 ANKRD65E5RJM6 399 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 IGKV2D-40P01614 121 aaPredicted RBP3.26□□□□□ -1.89
PTPN4-210ENST00000485247 CD3DP04234 171 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 NMBP08949 121 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 AKR1C4P17516 323 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 CACNG7P62955 275 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 Q0VG73 95 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 SCGB2B2Q4G0G5 96 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 LYZL2Q7Z4W2 148 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 SAMD12Q8N8I0 201 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 CYB561D1Q8N8Q1 229 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 TERB2Q8NHR7 220 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 YIPF6Q96EC8 236 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 RTBDNQ9BSG5 229 aaPredicted RBP3.26□□□□□ -1.89
PTPN4-210ENST00000485247 NAGKQ9UJ70 344 aa3.26□□□□□ -1.89
PTPN4-210ENST00000485247 C14orf166Q9Y224 244 aaKnown RBP3.26□□□□□ -1.89
PTPN4-210ENST00000485247 A0A087WWC5 75 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 LOC100506127A0A0U1RQW1 187 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 PGPA6NDG6 321 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 H3BP45 60 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 WRBO00258 174 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 CCSO14618 274 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 GNRH2O43555 120 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 SELENOTP62341 195 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 SLC38A11Q08AI6 406 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 ELOBQ15370 118 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 GUK1Q16774 197 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 MAJINQ3KP22 176 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 SPANXN5Q5MJ07 72 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 TMEM78Q5T7P6 136 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 CFAP126Q5VTH2 177 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 KCNIP4Q6PIL6 250 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 ENHOQ6UWT2 76 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 FAM159AQ6UWV7 190 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF664Q8N3J9 261 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 OR10G9Q8NGN4 311 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 Q8TAT8 98 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 THAP6Q8TBB0 222 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 RAB2BQ8WUD1 216 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 MRPL53Q96EL3 112 aaKnown RBP3.25□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF492Q9P255 531 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
PTPN4-210ENST00000485247 A0A0B4J2A0 478 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 SMIM31A0A1B0GVY4 71 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 COX7A2P2O60397 106 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 CRPP02741 224 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 MGST1P10620 155 aaKnown RBP3.24□□□□□ -1.89
PTPN4-210ENST00000485247 INPP1P49441 399 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
PTPN4-210ENST00000485247 RRAS2P62070 204 aaPredicted RBP3.24□□□□□ -1.89
PTPN4-210ENST00000485247 CNBPP62633 177 aaKnown RBP3.24□□□□□ -1.89
PTPN4-210ENST00000485247 SURF2Q15527 256 aaPredicted RBP3.24□□□□□ -1.89
PTPN4-210ENST00000485247 Q6ZRP5 223 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF546Q86UE3 836 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 EXOC3-AS1Q8N2X6 119 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms