RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C5orf17Q8NAS9 161 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 HIST1H2BAQ96A08 127 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 TMPRSS5Q9H3S3 457 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 NPIPB6E9PJ23 425 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 SLC17A3O00476 420 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 EREGO14944 169 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 RAB14P61106 215 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 ICAM4Q14773 271 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 C11orf72Q8NBR9 251 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 ZNF680Q8NEM1 530 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 LENEPQ9Y5L5 61 aa8.91□□□□□ -0.98
HDAC6-227ENST00000485102 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-227ENST00000485102 VPS13BQ7Z7G8 4022 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 TRAV12-3A0A0B4J271 114 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 PGPA6NDG6 321 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 HMGB3O15347 200 aaKnown RBP8.9□□□□□ -0.98
HDAC6-227ENST00000485102 NDUFB4O95168 129 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 S100A9P06702 114 aaKnown RBP8.9□□□□□ -0.98
HDAC6-227ENST00000485102 NMBP08949 121 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 INAFM2P0DMQ5 153 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 PRB4P10163 310 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-227ENST00000485102 ANXA2RQ3ZCQ2 193 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 ALKAL2Q6UX46 152 aa8.9□□□□□ -0.98
HDAC6-227ENST00000485102 MYCBP2O75592 4640 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 KLLNB2CW77 178 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 K7EP13 123 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 NDUFS6O75380 124 aaKnown RBP8.89□□□□□ -0.99
HDAC6-227ENST00000485102 ZNF324O75467 553 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-227ENST00000485102 ERVFC1-1P60608 527 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 SLAQ13239 276 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 ZNF726P1Q15940 193 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 NFE4Q86UQ8 179 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 NDFIP1Q9BT67 221 aa8.89□□□□□ -0.99
HDAC6-227ENST00000485102 PDE6DO43924 150 aa8.88□□□□□ -0.99
HDAC6-227ENST00000485102 SPINK4O60575 86 aa8.88□□□□□ -0.99
HDAC6-227ENST00000485102 SNRPCP09234 159 aaKnown RBP8.88□□□□□ -0.99
HDAC6-227ENST00000485102 CST9LP1Q5W188 147 aa8.88□□□□□ -0.99
HDAC6-227ENST00000485102 C9orf47Q6ZRZ4 202 aa8.88□□□□□ -0.99
HDAC6-227ENST00000485102 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
HDAC6-227ENST00000485102 GSN-AS1Q9NRJ2 163 aa8.88□□□□□ -0.99
HDAC6-227ENST00000485102 C7orf71A4D174 169 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 FAM74A7A6NL05 159 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 DIRC3C9JPN6 131 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 H3BTX0 84 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 NXPH4O95158 308 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 FGF8P55075 233 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-227ENST00000485102 TCL1AP56279 114 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
HDAC6-227ENST00000485102 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 IBA57Q5T440 356 aaKnown RBP8.87□□□□□ -0.99
HDAC6-227ENST00000485102 EIF4E3Q8N5X7 224 aaKnown RBP8.87□□□□□ -0.99
HDAC6-227ENST00000485102 CYB561D1Q8N8Q1 229 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 PRO0255Q9UI72 69 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 EPDR1Q9UM22 224 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
HDAC6-227ENST00000485102 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 TRGV1A0A0A0MS02 117 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 PAX4O43316 350 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 CRISP2P16562 243 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 ZNF138P52744 262 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 TMEM75Q8N9X5 138 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 LYPD6BQ8NI32 183 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 FRZBQ92765 325 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 VAX2Q9UIW0 290 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 BOLA1Q9Y3E2 137 aa8.86□□□□□ -0.99
HDAC6-227ENST00000485102 A0A087WTM6 91 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 J3KRW8 73 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 TCRAP04437 139 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 UBE2G1P62253 170 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
HDAC6-227ENST00000485102 Q5VSD8 79 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 FMC1Q96HJ9 113 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 AGPAT4-IT1Q9H0P7 198 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 GNG13Q9P2W3 67 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 KLF12Q9Y4X4 402 aa8.85□□□□□ -0.99
HDAC6-227ENST00000485102 M0R3E3 92 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 PAGE4O60829 102 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 BCL2P10415 239 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 CRYBA4P53673 196 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 UBE2G2P60604 165 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-227ENST00000485102 VGLL1Q99990 258 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 HHLA3Q9XRX5 114 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 ZFP30Q9Y2G7 519 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 TNFRSF18Q9Y5U5 241 aa8.84□□□□□ -0.99
HDAC6-227ENST00000485102 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
HDAC6-227ENST00000485102 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 GGTLC3B5MD39 225 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 PEX7O00628 323 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 AKR1C3P42330 323 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 FHL2Q14192 279 aa8.83□□□□□ -1
HDAC6-227ENST00000485102 GOLT1AQ6ZVE7 132 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms