RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GNRH2O43555 120 aa7.76□□□□□ -1.17
SCFD1-206ENST00000484733 CIDEAO60543 219 aa7.76□□□□□ -1.17
SCFD1-206ENST00000484733 WFDC10BQ8IUB3 73 aa7.76□□□□□ -1.17
SCFD1-206ENST00000484733 HYLS1Q96M11 299 aa7.76□□□□□ -1.17
SCFD1-206ENST00000484733 BOLA1Q9Y3E2 137 aa7.76□□□□□ -1.17
SCFD1-206ENST00000484733 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 TYMSP04818 313 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 DEFA1P59665 94 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 DEFA3P59666 94 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 GOLT1AQ6ZVE7 132 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 TVP23CQ96ET8 276 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 SDF2L1Q9HCN8 221 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 GATA1P15976 413 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-206ENST00000484733 SUN5Q8TC36 379 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 TREM1Q9NP99 234 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 NAGKQ9UJ70 344 aa7.75□□□□□ -1.17
SCFD1-206ENST00000484733 XGP55808 180 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 PTH2Q96A98 100 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 EPM2AB3EWF7 344 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 RAB2AP61019 212 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 OR10G9Q8NGN4 311 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 OR10G7Q8NGN6 311 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 OR2G3Q8NGZ4 309 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 RPH3ALQ9UNE2 315 aa7.74□□□□□ -1.17
SCFD1-206ENST00000484733 EIF3GO75821 320 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCFD1-206ENST00000484733 ASB13Q8WXK3 278 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 F6UZH7 168 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 RS1O15537 224 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 CRYGDP07320 174 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 STAG3L2P0CL84 134 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 STAG3L3P0CL85 134 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 NDFIP1Q9BT67 221 aa7.73□□□□□ -1.17
SCFD1-206ENST00000484733 TRAV8-1A0A0A6YYK1 113 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 PFN1P07737 140 aaKnown RBP7.72□□□□□ -1.17
SCFD1-206ENST00000484733 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 GNG5P63218 68 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 LINC01556Q5JQF7 62 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 PSMG3Q9BT73 122 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-206ENST00000484733 LOC100131303A0A0U1RQF7 123 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 FBLL1A6NHQ2 334 aaKnown RBP7.72□□□□□ -1.17
SCFD1-206ENST00000484733 TAAR5O14804 337 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 TCRAP04437 139 aa7.72□□□□□ -1.17
SCFD1-206ENST00000484733 CDC34P49427 236 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-206ENST00000484733 TRBV6-4A0A1B0GX49 114 aa7.71□□□□□ -1.18
SCFD1-206ENST00000484733 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
SCFD1-206ENST00000484733 ARL14EPLP0DKL9 152 aa7.71□□□□□ -1.18
SCFD1-206ENST00000484733 C9orf85Q96MD7 179 aa7.71□□□□□ -1.18
SCFD1-206ENST00000484733 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 K7EQM0 130 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 MBP02144 154 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 GCSHP23434 173 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 GCHFRP30047 84 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 FUSP35637 526 aaKnown RBP eCLIP7.7□□□□□ -1.18
SCFD1-206ENST00000484733 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 PRADC1Q9BSG0 188 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 PSG8Q9UQ74 426 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 TRAV8-6A0A0B4J262 113 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 IGLV2-11P01706 119 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 PPT1P50897 306 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-206ENST00000484733 SERF2P84101 59 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 RHOHQ15669 191 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 SLC25A29Q8N8R3 303 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 NHLRC2Q8NBF2 726 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 NTN5Q8WTR8 489 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-206ENST00000484733 RAB24Q969Q5 203 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 AQP10Q96PS8 301 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 TMEM167BQ9NRX6 74 aa7.7□□□□□ -1.18
SCFD1-206ENST00000484733 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 HMGB3O15347 200 aaKnown RBP7.69□□□□□ -1.18
SCFD1-206ENST00000484733 EPDR1Q9UM22 224 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 ATP6V0CP27449 155 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 LELP1Q5T871 98 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 DPPA3Q6W0C5 159 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 TMEM75Q8N9X5 138 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 ALG5Q9Y673 324 aa7.69□□□□□ -1.18
SCFD1-206ENST00000484733 CXorf1O96002 111 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 GCGP01275 180 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 FLI1Q01543 452 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-206ENST00000484733 SAPCD1Q5SSQ6 148 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 TNFSF18Q9UNG2 199 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 PGPEP1LA6NFU8 196 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 SUMO1P63165 101 aaKnown RBP7.68□□□□□ -1.18
SCFD1-206ENST00000484733 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 HSD17B11Q8NBQ5 300 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 FRZBQ92765 325 aa7.68□□□□□ -1.18
SCFD1-206ENST00000484733 ACTR3CQ9C0K3 210 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-206ENST00000484733 FAT1Q14517 4588 aa7.67□□□□□ -1.18
SCFD1-206ENST00000484733 A0A1W2PRE2 83 aa7.67□□□□□ -1.18
SCFD1-206ENST00000484733 MGST1P10620 155 aaKnown RBP7.67□□□□□ -1.18
SCFD1-206ENST00000484733 RNASE3P12724 160 aaKnown RBP7.67□□□□□ -1.18
SCFD1-206ENST00000484733 ZFP69Q49AA0 526 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms